Pre_GI: BLASTP Hits

Subject	Start	End	Length	Subject Host Description	CDS description	E-value	Bit score
NC_016830:4010637:4044188	4044188	4045711	1524	Pseudomonas fluorescens F113 chromosome, complete genome	protein NorR2	0	906
NC_014618:1040381:1066706	1066706	1068217	1512	Enterobacter cloacae SCF1 chromosome, complete genome	sigma 54 interacting domain-containing protein	0	661
NC_007645:1378337:1379957	1379957	1381552	1596	Hahella chejuensis KCTC 2396, complete genome	sigma 54-dependent transcriptional activator containing GAF domain	2e-127	456
NC_004129:5781413:5799155	5799155	5800711	1557	Pseudomonas fluorescens Pf-5, complete genome	anaerobic nitric oxide reductase transcription regulator	1e-119	430
NC_014972:480355:481471	481471	483039	1569	Desulfobulbus propionicus DSM 2032 chromosome, complete genome	transcriptional regulator, NifA subfamily, Fis Family	5e-111	401
NC_008314:2611873:2634068	2634068	2635633	1566	Ralstonia eutropha H16 chromosome 2, complete sequence	nitric oxide reductase regulator (NorR2)	8e-110	397
NC_012881:4097552:4118624	4118624	4120015	1392	Desulfovibrio salexigens DSM 2638, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	2e-66	253
NC_008095:1428665:1456721	1456721	1458154	1434	Myxococcus xanthus DK 1622, complete genome	sigma-54 dependent DNA-binding response regulator SasR	3e-66	253
NC_015410:617020:637676	637676	639607	1932	Pseudomonas mendocina NK-01 chromosome, complete genome	transcriptional regulatory protein	4e-66	252
NC_011979:3712845:3723132	3723132	3724505	1374	Geobacter sp. FRC-32, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	1e-65	251
NC_017096:779550:785168	785168	786580	1413	Caldisericum exile AZM16c01, complete genome	NtrC family two-component system response regulator	9e-66	251
NC_012108:442493:443844	443844	445325	1482	Desulfobacterium autotrophicum HRM2, complete genome	sigma-54 dependent transcriptional activator (PAS/PAC domain protein)	8e-66	251
NC_011027:1763952:1765133	1765133	1766752	1620	Chlorobaculum parvum NCIB 8327, complete genome	transcriptional regulator, NifA subfamily, Fis Family	2e-65	250
NC_014840:286767:303628	303628	305199	1572	Pantoea sp. At-9b plasmid pPAT9B03, complete sequence	transcriptional regulator, NifA subfamily, Fis Family	2e-65	250
NC_004463:2158116:2196192	2196192	2198009	1818	Bradyrhizobium japonicum USDA 110, complete genome	nif-specific regulatory protein	4e-65	249
NC_017249:7993713:8079973	8079973	8081721	1749	Bradyrhizobium japonicum USDA 6, complete genome	Nif-specific regulatory protein	4e-65	249
NC_015681:1859674:1877599	1877599	1878993	1395	Thermodesulfatator indicus DSM 15286 chromosome, complete genome	Fis family two component sigma-54 specific transcriptional regulator	3e-65	249
NC_014500:1646854:1670755	1670755	1672938	2184	Dickeya dadantii 3937 chromosome, complete genome	DNA-binding transcriptional activator	2e-65	249
NC_007759:964000:981743	981743	983116	1374	Syntrophus aciditrophicus SB, complete genome	response regulator containing sigma 54 interaction domain	1e-64	247
NC_012997:4672147:4672147	4672147	4674075	1929	Teredinibacter turnerae T7901, complete genome	transcriptional regulator, Fis family	1e-64	247
NC_015732:773143:775534	775534	777036	1503	Spirochaeta caldaria DSM 7334 chromosome, complete genome	transcriptional regulator, NifA subfamily, Fis Family	4e-64	246
NC_009801:3013838:3017529	3017529	3019607	2079	Escherichia coli E24377A, complete genome	formate hydrogenlyase transcriptional activator	4e-64	246
NC_014758:245707:261287	261287	262615	1329	Calditerrivibrio nitroreducens DSM 19672 chromosome, complete	two component, sigma54 specific, transcriptional regulator, fis family	4e-64	246
NC_008253:2828573:2831910	2831910	2833988	2079	Escherichia coli 536, complete genome	formate hydrogenlyase transcriptional activator	2e-64	246
NC_009483:5113729:5121392	5121392	5122792	1401	Geobacter uraniireducens Rf4 chromosome, complete genome	two component sigma-54 specific Fis family transcriptional regulator	5e-64	245
NC_010102:2967464:2967464	2967464	2969653	2190	Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,	hypothetical protein	2e-63	244
NC_009348:1893292:1909087	1909087	1911201	2115	Aeromonas salmonicida subsp. salmonicida A449, complete genome	formate hydrogen-lyase transcriptional activator	1e-63	244
NC_012125:2938519:2938519	2938519	2940582	2064	Salmonella enterica subsp. enterica serovar Paratyphi C strain	transcriptional activator of the formate hydrogenlyase system	1e-63	244
NC_015711:570910:596014	596014	597423	1410	Myxococcus fulvus HW-1 chromosome, complete genome	sigma-54 dependent DNA-binding response regulator SasR	1e-63	244
NC_011149:2912219:2912219	2912219	2914297	2079	Salmonella enterica subsp. enterica serovar Agona str. SL483,	formate hydrogenlyase transcriptional activator	1e-63	244
NC_012560:3416451:3419317	3419317	3420798	1482	Azotobacter vinelandii DJ, complete genome	sigma54-dependent activator protein	2e-63	243
NC_021150:3416450:3419316	3419316	3420797	1482	Azotobacter vinelandii CA6, complete genome	sigma54-dependent activator protein	2e-63	243
NC_018515:3600869:3608117	3608117	3609760	1644	Desulfosporosinus meridiei DSM 13257 chromosome, complete genome	transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains	2e-63	243
NC_010067:84093:107856	107856	109919	2064	Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete	hypothetical protein	2e-63	243
NC_012438:159927:181427	181427	182782	1356	Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genome	acetoacetate metabolism regulatory protein AtoC (ornithine/argininedecarboxylase inhibitor) (ornithine decarboxylase antizyme)	2e-63	243
NC_011147:2814664:2814664	2814664	2816742	2079	Salmonella enterica subsp. enterica serovar Paratyphi A str	transcriptional activator of the formate hydrogenlyase system	4e-63	242
NC_006511:2819128:2819128	2819128	2821206	2079	Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC	transcriptional activator of the formate hydrogenlyase system	4e-63	242
NC_015638:3113253:3120131	3120131	3125929	5799	Lacinutrix sp. 5H-3-7-4 chromosome, complete genome	transcriptional regulator, NifA subfamily, Fis Family	5e-63	242
NC_016584:4601645:4619082	4619082	4620725	1644	Desulfosporosinus orientis DSM 765 chromosome, complete genome	transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains	9e-63	241
NC_020304:1222000:1239213	1239213	1240841	1629	Desulfocapsa sulfexigens DSM 10523, complete genome	GAF, AAA-type ATPase, and DNA binding domain-containing transcriptional regulator	7e-63	241
NC_008095:8698766:8721562	8721562	8722995	1434	Myxococcus xanthus DK 1622, complete genome	sigma-54 dependent DNA-binding response regulator	7e-63	241
NC_011146:3376816:3382724	3382724	3384097	1374	Geobacter bemidjiensis Bem, complete genome	PAS modulated sigma54 specific transcriptional regulator, Fis family	1e-62	240
NC_016832:2829767:2829767	2829767	2831830	2064	Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,	Formate hydrogenlyase transcriptional activator	5e-62	239
NC_004631:2842453:2842453	2842453	2844531	2079	Salmonella enterica subsp. enterica serovar Typhi Ty2, complete	transcriptional activator of the formate hydrogenlyase system	5e-62	239
NC_003198:2856596:2856596	2856596	2858674	2079	Salmonella enterica subsp. enterica serovar Typhi str. CT18,	transcriptional activator of the formate hydrogenlyase system	5e-62	239
NC_013173:1609123:1616217	1616217	1618637	2421	Desulfomicrobium baculatum DSM 4028, complete genome	sigma54 specific transcriptional regulator with PAS/PAC sensor, Fis family	4e-62	239
NC_020126:7285452:7290860	7290860	7292353	1494	Myxococcus stipitatus DSM 14675, complete genome	Fis family transcriptional regulator	3e-62	239
NC_008741:15699:21064	21064	22611	1548	Desulfovibrio vulgaris subsp. vulgaris DP4 plasmid pDVUL01,	transcriptional regulator, NifA, Fis Family	3e-62	239
NC_006138:2630338:2645743	2645743	2647383	1641	Desulfotalea psychrophila LSv54, complete genome	similar to hydrogenase-4 transcriptional activator	3e-62	239
NC_014484:1163576:1187621	1187621	1189132	1512	Spirochaeta thermophila DSM 6192 chromosome, complete genome	transcriptional regulatory protein	3e-62	239
NC_015565:1511426:1518452	1518452	1519813	1362	Desulfotomaculum carboxydivorans CO-1-SRB chromosome, complete	PAS modulated sigma54 specific Fis family transcriptional regulator	2e-62	239
NC_010505:4820000:4820091	4820091	4821914	1824	Methylobacterium radiotolerans JCM 2831, complete genome	transcriptional regulator, Fis family	2e-62	239
NC_013939:1001974:1007134	1007134	1008486	1353	Deferribacter desulfuricans SSM1, complete genome	two-component, sigma54 specific, transcriptional regulator	1e-61	238
NC_011979:3880488:3881874	3881874	3883253	1380	Geobacter sp. FRC-32, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	7e-62	238
NC_008340:774206:787693	787693	789375	1683	Alkalilimnicola ehrlichei MLHE-1, complete genome	sigma54 specific transcriptional regulator, Fis family	1e-61	237
NC_013960:841181:843980	843980	845242	1263	Nitrosococcus halophilus Nc4 chromosome, complete genome	sigma-54 factor interaction domain-containing protein	1e-61	237
NC_020126:6264651:6270878	6270878	6272281	1404	Myxococcus stipitatus DSM 14675, complete genome	DNA-binding response regulator	2e-61	237
NC_012483:483425:524265	524265	526610	2346	Acidobacterium capsulatum ATCC 51196, complete genome	sigma-54 dependent transcriptional regulator, Fis family	2e-61	237
NC_014836:993448:1014670	1014670	1016055	1386	Desulfurispirillum indicum S5 chromosome, complete genome	sigma-54 factor interaction domain-containing protein	3e-61	236
NC_011979:1683964:1687718	1687718	1689082	1365	Geobacter sp. FRC-32, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	3e-61	236
NC_014355:2210884:2230879	2230879	2232297	1419	Candidatus Nitrospira defluvii, complete genome	sigma-54 dependent response regulator FleR	3e-61	236
NC_010814:2394250:2394250	2394250	2395632	1383	Geobacter lovleyi SZ, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	2e-61	236
NC_013959:826868:841156	841156	842709	1554	Sideroxydans lithotrophicus ES-1 chromosome, complete genome	transcriptional regulator, NifA, Fis Family	5e-61	235
NC_008570:2768795:2772551	2772551	2774680	2130	Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome	formate hydrogenlyase transcriptional activator	5e-61	235
NC_009253:1381401:1403490	1403490	1404857	1368	Desulfotomaculum reducens MI-1 chromosome, complete genome	two component sigma-54 specific Fis family transcriptional regulator	5e-61	235
NC_014926:875948:889585	889585	890904	1320	Thermovibrio ammonificans HB-1 chromosome, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	2e-60	234
NC_002939:360462:389808	389808	391184	1377	Geobacter sulfurreducens PCA, complete genome	sensory box protein/sigma-54 dependent transcriptional regulator	2e-60	234
NC_011146:2916223:2921792	2921792	2923165	1374	Geobacter bemidjiensis Bem, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	1e-60	234
NC_015733:715947:746474	746474	747823	1350	Pseudomonas putida S16 chromosome, complete genome	two component sigma54 specific Fis family transcriptional regulator	1e-60	234
NC_013943:2431643:2449907	2449907	2451328	1422	Denitrovibrio acetiphilus DSM 12809 chromosome, complete genome	Fis family two component sigma-54 specific transcriptional regulator	9e-61	234
NC_015577:1974821:1977256	1977256	1978767	1512	Treponema azotonutricium ZAS-9 chromosome, complete genome	NifA subfamily transcriptional regulator, Fis family transcriptional regulator	3e-60	233
NC_008554:4586543:4606428	4606428	4607819	1392	Syntrophobacter fumaroxidans MPOB, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	3e-60	233
NC_007973:1411714:1419138	1419138	1420982	1845	Ralstonia metallidurans CH34 chromosome 1, complete sequence	sigma-54 factor, interaction region	2e-60	233
NC_007907:5428247:5457483	5457483	5458874	1392	Desulfitobacterium hafniense Y51, complete genome	hypothetical protein	2e-60	233
NC_009613:781180:788821	788821	789984	1164	Flavobacterium psychrophilum JIP02/86, complete genome	sigma-54 dependent two-component system response regulatory protein	2e-60	233
NC_013722:3081459:3081459	3081459	3082796	1338	Xanthomonas albilineans, complete genome	probable two component system regulatory protein, sigma 54-dependent	5e-60	232
NC_020291:2487575:2501932	2501932	2503476	1545	Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome	PAS domain-containing S-box protein	5e-60	232
NC_011565:665515:673011	673011	674576	1566	Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,	Nif-specific regulatory protein	1e-59	231
NC_014355:2210884:2225827	2225827	2227242	1416	Candidatus Nitrospira defluvii, complete genome	sigma-54 dependent response regulator FleQ	9e-60	231
NC_012918:2850755:2849394	2849394	2850758	1365	Geobacter sp. M21 chromosome, complete genome	Fis family transcriptional regulator	9e-60	231
NC_015424:2357600:2357600	2357600	2359732	2133	Aeromonas veronii B565 chromosome, complete genome	formate hydrogenlyase transcriptional activator	8e-60	231
NC_014216:2054860:2075727	2075727	2077082	1356	Desulfurivibrio alkaliphilus AHT2 chromosome, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	7e-60	231
NC_016631:1329702:1338902	1338902	1341058	2157	Granulicella mallensis MP5ACTX8 chromosome, complete genome	Fis family NifA subfamily transcriptional regulator	2e-59	230
CU928145:3196173:3228149	3228149	3229927	1779	Escherichia coli 55989 chromosome, complete genome	putative DNA-binding transcriptional regulator	4e-59	229
NC_013364:3552284:3584233	3584233	3586011	1779	Escherichia coli O111:H- str. 11128, complete genome	putative DNA-binding transcriptional regulator	4e-59	229
NC_011751:3285646:3326567	3326567	3328345	1779	Escherichia coli UMN026 chromosome, complete genome	putative DNA-binding transcriptional regulator	4e-59	229
NC_011894:4066926:4079172	4079172	4080971	1800	Methylobacterium nodulans ORS 2060, complete genome	transcriptional regulator, NifA, Fis Family	4e-59	229
NC_015565:1281397:1281397	1281397	1282761	1365	Desulfotomaculum carboxydivorans CO-1-SRB chromosome, complete	two component, sigma54 specific, Fis family transcriptional regulator	4e-59	229
NC_007384:3151344:3173703	3173703	3175481	1779	Shigella sonnei Ss046, complete genome	putative transcriptional regulator	4e-59	229
NC_013941:3540420:3566343	3566343	3568121	1779	Escherichia coli O55:H7 str. CB9615 chromosome, complete genome	transcriptional regulator	5e-59	229
NC_013939:1460142:1467930	1467930	1469306	1377	Deferribacter desulfuricans SSM1, complete genome	two-component, sigma54 specific, transcriptional regulator	5e-59	229
NC_013008:3761467:3801462	3801462	3803240	1779	Escherichia coli O157:H7 str. TW14359 chromosome, complete genome	DNA-binding transcriptional regulator	5e-59	229
NC_011353:3805819:3846736	3846736	3848514	1779	Escherichia coli O157:H7 str. EC4115 chromosome, complete genome	Fis family sigma-54 dependent transcriptional regulator	5e-59	229
NC_002655:3769643:3809645	3809645	3811423	1779	Escherichia coli O157:H7 EDL933, complete genome	putative transcriptional regulator	5e-59	229
NC_002695:3702344:3742339	3742339	3744117	1779	Escherichia coli O157:H7 str. Sakai, complete genome	putative transcriptional regulator	5e-59	229
NC_010468:906957:906957	906957	908735	1779	Escherichia coli ATCC 8739, complete genome	PAS modulated sigma54 specific transcriptional regulator, Fis family	4e-59	229
NC_011750:3407500:3431294	3431294	3433072	1779	Escherichia coli IAI39 chromosome, complete genome	putative DNA-binding transcriptional regulator	4e-59	229
CU928160:3030324:3062264	3062264	3064042	1779	Escherichia coli IAI1 chromosome, complete genome	putative DNA-binding transcriptional regulator	4e-59	229
NC_009801:3175714:3207650	3207650	3209428	1779	Escherichia coli E24377A, complete genome	sigma-54 dependent transcriptional regulator, Fis family	3e-59	229
NC_014220:2102000:2114839	2114839	2116797	1959	Syntrophothermus lipocalidus DSM 12680 chromosome, complete genome	PAS modulated sigma54 specific transcriptional regulator, Fis family	3e-59	229
NC_008607:11663:20206	20206	21561	1356	Pelobacter propionicus DSM 2379 plasmid pPRO1, complete sequence	two component, sigma54 specific, transcriptional regulator, Fis family	3e-59	229
NC_013353:3474077:3511623	3511623	3513395	1773	Escherichia coli O103:H2 str. 12009, complete genome	DNA-binding transcriptional regulator	4e-59	229
NC_012759:2862807:2889178	2889178	2890956	1779	Escherichia coli BW2952 chromosome, complete genome	putative DNA-binding transcriptional regulator	4e-59	229
AP010958:3474077:3511623	3511623	3513395	1773	Escherichia coli O103:H2 str. 12009 DNA, complete genome	predicted DNA-binding transcriptional regulator	4e-59	229
AC_000091:2976293:3002664	3002664	3004442	1779	Escherichia coli W3110 DNA, complete genome	predicted DNA-binding transcriptional regulator	4e-59	229
NC_011748:3196173:3228149	3228149	3229927	1779	Escherichia coli 55989, complete genome	putative DNA-binding transcriptional regulator	4e-59	229
NC_011415:3217796:3249734	3249734	3251512	1779	Escherichia coli SE11 chromosome, complete genome	putative transcriptional regulator	4e-59	229
NC_011741:3030324:3062264	3062264	3064042	1779	Escherichia coli IAI1 chromosome, complete genome	putative DNA-binding transcriptional regulator	4e-59	229
NC_000913:2975659:3002030	3002030	3003808	1779	Escherichia coli K12, complete genome	predicted DNA-binding transcriptional regulator	4e-59	229
NC_010473:3069529:3095900	3095900	3097678	1779	Escherichia coli str. K-12 substr. DH10B, complete genome	predicted DNA-binding transcriptional regulator	4e-59	229
NC_013173:2507516:2523661	2523661	2525031	1371	Desulfomicrobium baculatum DSM 4028, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	1e-58	228
NC_009328:2808897:2819630	2819630	2821090	1461	Geobacillus thermodenitrificans NG80-2 chromosome, complete genome	sigma-54-dependent transcriptional activator	1e-58	228
NC_013194:4964000:4985533	4985533	4987143	1611	Candidatus Accumulibacter phosphatis clade IIA str. UW-1, complete	transcriptional regulator, NifA, Fis Family	1e-58	228
NC_008011:860000:861756	861756	863153	1398	Lawsonia intracellularis PHE/MN1-00, complete genome	Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains	1e-58	228
NC_015185:875324:885567	885567	886892	1326	Desulfurobacterium thermolithotrophum DSM 11699 chromosome,	two component, sigma54 specific, transcriptional regulator, Fis family	9e-59	228
NC_016584:4478200:4494340	4494340	4496301	1962	Desulfosporosinus orientis DSM 765 chromosome, complete genome	transcriptional activator of acetoin/glycerol metabolism	8e-59	228
NC_016024:1099602:1116328	1116328	1117719	1392	Candidatus Chloracidobacterium thermophilum B chromosome chromosome	two component, sigma54 specific, Fis family transcriptional regulator	6e-59	228
CP002516:903241:903241	903241	905019	1779	Escherichia coli KO11, complete genome	PAS modulated sigma54 specific transcriptional regulator, Fis family	5e-59	228
CP002185:3167738:3201057	3201057	3202835	1779	Escherichia coli W, complete genome	predicted DNA-binding transcriptional regulator	5e-59	228
NC_016902:903241:903241	903241	905019	1779	Escherichia coli KO11FL chromosome, complete genome	PAS modulated Fis family sigma-54-specific transcriptional regulator	5e-59	228
NC_013315:3532721:3551114	3551114	3552931	1818	Clostridium difficile CD196 chromosome, complete genome	sigma54-dependent transcriptional regulator	2e-58	227
NC_017179:3540739:3559132	3559132	3560937	1806	Clostridium difficile BI1, complete genome	sigma-54-dependent transcriptional regulator	2e-58	227
NC_014355:2210884:2216919	2216919	2218334	1416	Candidatus Nitrospira defluvii, complete genome	sigma-54 dependent DNA-binding response regulator	2e-58	227
NC_007503:1383255:1383255	1383255	1385453	2199	Carboxydothermus hydrogenoformans Z-2901, complete genome	sigma-54 dependent transcriptional regulator	1e-58	227
NC_010723:575254:582614	582614	584356	1743	Clostridium botulinum E3 str. Alaska E43, complete genome	hypothetical sigma-54-dependent transcriptional regulator YgeV	1e-58	227
NC_011296:102650:125844	125844	127211	1368	Thermodesulfovibrio yellowstonii DSM 11347, complete genome	acetoacetate metabolism regulatory protein AtoC	4e-58	226
NC_007508:2277640:2295491	2295491	2296975	1485	Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome	flagellar sigma-54 dependent transcriptional activator FleQ	3e-58	226
NC_003296:262118:284279	284279	286150	1872	Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete	PUTATIVE PHENOL-DEGRADATIVE GENE REGULATOR TRANSCRIPTION REGULATOR PROTEIN	3e-58	226
NC_011296:1086223:1086223	1086223	1087563	1341	Thermodesulfovibrio yellowstonii DSM 11347, complete genome	acetoacetate metabolism regulatory protein AtoC	3e-58	226
NC_010674:615963:618479	618479	620221	1743	Clostridium botulinum B str. Eklund 17B, complete genome	hypothetical sigma-54-dependent transcriptional regulator YgeV	2e-58	226
NC_019940:389979:411371	411371	412954	1584	Thioflavicoccus mobilis 8321 chromosome, complete genome	transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains	7e-58	225
NC_016620:3259749:3272490	3272490	3274061	1572	Bacteriovorax marinus SJ, complete genome	putative sigma54-binding transcriptional regulator	7e-58	225
NC_011979:589874:605591	605591	606955	1365	Geobacter sp. FRC-32, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	6e-58	225
NC_007645:1033834:1033834	1033834	1035270	1437	Hahella chejuensis KCTC 2396, complete genome	nitrogen regulation protein NR(I)	6e-58	225
NC_014220:481923:495077	495077	496804	1728	Syntrophothermus lipocalidus DSM 12680 chromosome, complete genome	PAS modulated sigma54 specific transcriptional regulator, Fis family	5e-58	225
NC_012560:4929683:4961738	4961738	4963351	1614	Azotobacter vinelandii DJ, complete genome	sigma54-dependent transcriptional activator for the iron only nitrogenase, AnfA	5e-58	225
NC_021150:4929670:4961725	4961725	4963338	1614	Azotobacter vinelandii CA6, complete genome	sigma54-dependent transcriptional activator for the iron only nitrogenase, AnfA	5e-58	225
NC_016023:875416:876749	876749	878410	1662	Bacillus coagulans 36D1 chromosome, complete genome	putative sigma54 specific transcriptional regulator	5e-58	225
NC_017271:2278500:2295632	2295632	2297122	1491	Xanthomonas campestris pv. raphani 756C chromosome, complete	transcriptional regulator	5e-58	225
NC_021184:1125000:1138756	1138756	1140240	1485	Desulfotomaculum gibsoniae DSM 7213, complete genome	PAS domain S-box	5e-58	225
NC_016843:547149:561173	561173	562549	1377	Treponema pallidum subsp. pertenue str. Gauthier chromosome,	sigma-54 dependent response regulator	2e-57	224
NC_016842:546661:560685	560685	562061	1377	Treponema pallidum subsp. pertenue str. SamoaD chromosome, complete	sigma-54 dependent response regulator	2e-57	224
NC_000919:545141:559165	559165	560541	1377	Treponema pallidum subsp. pallidum str. Nichols, complete genome	response regulatory protein (atoC)	2e-57	224
NC_010741:546573:560597	560597	561973	1377	Treponema pallidum subsp. pallidum SS14, complete genome	response regulatory protein	2e-57	224
NC_016844:547069:561093	561093	562469	1377	Treponema pallidum subsp. pallidum DAL-1 chromosome, complete	sigma-54 dependent response regulator	2e-57	224
NC_016848:547115:561139	561139	562515	1377	Treponema pallidum subsp. pertenue str. CDC2 chromosome, complete	sigma-54 dependent response regulator	2e-57	224
NC_017268:546376:560400	560400	561776	1377	Treponema pallidum subsp. pallidum str. Chicago chromosome,	acetoacetate metabolism regulatory protein AtoC	2e-57	224
NC_021508:546592:560616	560616	561992	1377	Treponema pallidum subsp. pallidum SS14, complete genome	sigma-54 dependent response regulator	2e-57	224
NC_004557:2677155:2688513	2688513	2690072	1560	Clostridium tetani E88, complete genome	transcriptional regulator	1e-57	224
NC_014032:3330596:3335105	3335105	3336643	1539	Salinibacter ruber M8 chromosome, complete genome	nitrogen regulation protein NtrC	8e-58	224
NC_014484:371500:380883	380883	382208	1326	Spirochaeta thermophila DSM 6192 chromosome, complete genome	putative two component, sigma-54 specific, transcriptional regulator, Fis family nitrogen assimilation	3e-57	223
NC_015850:510837:529875	529875	531275	1401	Acidithiobacillus caldus SM-1 chromosome, complete genome	Fis family sigma-54 specific transcriptional regulator	3e-57	223
NC_009698:3553365:3553365	3553365	3555374	2010	Clostridium botulinum A str. Hall chromosome, complete genome	sensory box sigma-54 dependent transcriptional regulator	3e-57	223
NC_008009:4421992:4425167	4425167	4426306	1140	Acidobacteria bacterium Ellin345, complete genome	transcriptional regulator, Fis family	3e-57	223
NC_011080:4177443:4177443	4177443	4178852	1410	Salmonella enterica subsp. enterica serovar Newport str. SL254,	nitrogen regulation protein NR	3e-57	223
NC_014220:587826:606641	606641	608149	1509	Syntrophothermus lipocalidus DSM 12680 chromosome, complete genome	PAS modulated sigma54 specific transcriptional regulator, Fis family	2e-57	223
NC_015850:761500:793540	793540	794895	1356	Acidithiobacillus caldus SM-1 chromosome, complete genome	PAS modulated Fis family sigma-54 specific transcriptional regulator	6e-57	222
NC_014377:2033781:2044106	2044106	2046070	1965	Thermosediminibacter oceani DSM 16646 chromosome, complete genome	GAF modulated sigma54 specific transcriptional regulator, Fis family	6e-57	222
NC_011769:787496:809764	809764	811125	1362	Desulfovibrio vulgaris str. 'Miyazaki F', complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	6e-57	222
NC_015714:542679:556708	556708	558084	1377	Treponema paraluiscuniculi Cuniculi A chromosome, complete genome	sigma-54 dependent response regulator	6e-57	222
NC_011979:3341099:3366059	3366059	3367438	1380	Geobacter sp. FRC-32, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	6e-57	222
NC_020409:621792:666032	666032	667402	1371	Desulfovibrio piezophilus str. nov C1TLV30 chromosome, complete	Transcriptional regulatory protein zraR	6e-57	222
NC_007520:2391675:2411263	2411263	2412633	1371	Thiomicrospira crunogena XCL-2, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	5e-57	222
NC_014328:4387303:4422815	4422815	4424557	1743	Clostridium ljungdahlii ATCC 49587 chromosome, complete genome	putative transcriptional regulatory protein	5e-57	222
NC_007645:6049340:6055503	6055503	6056861	1359	Hahella chejuensis KCTC 2396, complete genome	sigma 54-dependent transcriptional activator containing CheY-like receiver domain	5e-57	222
NC_013730:906389:916016	916016	917488	1473	Spirosoma linguale DSM 74, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	4e-57	222
NC_007512:1539095:1540713	1540713	1542002	1290	Pelodictyon luteolum DSM 273, complete genome	putative transcriptional regulator, Fis family	1e-56	221
NC_009484:1627734:1635771	1635771	1637126	1356	Acidiphilium cryptum JF-5 chromosome, complete genome	two component sigma54 specific Fis family transcriptional regulator	1e-56	221
NC_015966:2337833:2370093	2370093	2371523	1431	Rhodothermus marinus SG0.5JP17-172 chromosome, complete genome	two component, sigma54 specific, Fis family transcriptional regulator	1e-56	221
NC_015587:1232642:1232642	1232642	1233961	1320	Hydrogenobaculum sp. SHO chromosome, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	1e-56	221
NC_015557:1232772:1232772	1232772	1234091	1320	Hydrogenobaculum sp. 3684 chromosome, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	1e-56	221
NC_020411:1232962:1232962	1232962	1234281	1320	Hydrogenobaculum sp. HO, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	1e-56	221
NC_015186:1698000:1706033	1706033	1707388	1356	Acidiphilium multivorum AIU301, complete genome	transcriptional regulatory protein FlbD	1e-56	221
NC_008340:2272692:2284341	2284341	2285795	1455	Alkalilimnicola ehrlichei MLHE-1, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	1e-56	221
NC_007517:2342607:2362565	2362565	2364289	1725	Geobacter metallireducens GS-15, complete genome	transcriptional regulator, Fis family	7e-57	221
NS_000195:1785910:1785910	1785910	1790274	4365	Candidatus Cloacamonas acidaminovorans	hypothetical protein	7e-57	221
NC_008609:3672653:3699111	3699111	3700508	1398	Pelobacter propionicus DSM 2379, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	7e-57	221
NC_010814:1739706:1766648	1766648	1768018	1371	Geobacter lovleyi SZ, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	9e-57	221
NC_012108:3922511:3922511	3922511	3924088	1578	Desulfobacterium autotrophicum HRM2, complete genome	sigma-54 dependent DNA-binding response regulator	1e-56	221
NC_010814:2275199:2307133	2307133	2308494	1362	Geobacter lovleyi SZ, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	1e-56	221
NC_018679:1738126:1758750	1758750	1760252	1503	Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, complete	response regulator receiver protein	2e-56	220
NC_016745:2913712:2916236	2916236	2917684	1449	Oceanimonas sp. GK1 chromosome, complete genome	FleQ protein	2e-56	220
NC_015566:1206500:1235486	1235486	1236823	1338	Serratia sp. AS12 chromosome, complete genome	two component, sigma54 specific, Fis family transcriptional regulator	2e-56	220
NC_015567:1206727:1235671	1235671	1237008	1338	Serratia sp. AS9 chromosome, complete genome	two component, sigma54 specific, Fis family transcriptional regulator	2e-56	220
NC_012489:2913920:2926977	2926977	2928638	1662	Gemmatimonas aurantiaca T-27, complete genome	putative NtrC family two-component response regulator	2e-56	220
NC_014206:2971304:2974878	2974878	2976809	1932	Geobacillus sp. C56-T3 chromosome, complete genome	Fis family GAF modulated sigma-54 specific transcriptional regulator	2e-56	220
NC_002939:1021297:1038168	1038168	1039571	1404	Geobacter sulfurreducens PCA, complete genome	sigma-54 dependent DNA-binding response regulator	2e-56	220
NC_014216:2027017:2030562	2030562	2032145	1584	Desulfurivibrio alkaliphilus AHT2 chromosome, complete genome	sigma54 specific transcriptional regulator, Fis family	2e-56	220
NC_016816:1970189:1970189	1970189	1972075	1887	Pantoea ananatis LMG 5342, complete genome	Fis family sigma-54 specific transcriptional regulator	2e-56	220
NC_015573:3243613:3256561	3256561	3258234	1674	Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genome	Fis family PAS modulated sigma-54 specific transcriptional regulator	2e-56	220
NC_002939:1634843:1640718	1640718	1642094	1377	Geobacter sulfurreducens PCA, complete genome	sigma-54 dependent DNA-binding response regulator	2e-56	220
NC_007907:1996194:1996194	1996194	1998305	2112	Desulfitobacterium hafniense Y51, complete genome	hypothetical protein	4e-56	219
NC_010814:1441327:1486047	1486047	1487591	1545	Geobacter lovleyi SZ, complete genome	putative phytochrome sensor protein	4e-56	219
NC_008027:3677500:3684357	3684357	3685418	1062	Pseudomonas entomophila L48, complete genome	sigma-54 dependent transcriptional regulator	4e-56	219
NC_010334:3040589:3039240	3039240	3040592	1353	Shewanella halifaxensis HAW-EB4, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	4e-56	219
NC_021184:3961552:3971822	3971822	3973573	1752	Desulfotomaculum gibsoniae DSM 7213, complete genome	PAS domain S-box	4e-56	219
NC_015732:773143:773143	773143	774555	1413	Spirochaeta caldaria DSM 7334 chromosome, complete genome	PAS modulated sigma54 specific transcriptional regulator, Fis family	5e-56	219
NC_010718:2265447:2288892	2288892	2290568	1677	Natranaerobius thermophilus JW/NM-WN-LF, complete genome	putative sigma54 specific transcriptional regulator	4e-56	219
NC_010814:903199:916626	916626	918257	1632	Geobacter lovleyi SZ, complete genome	putative sigma54 specific transcriptional regulator	4e-56	219
NC_007508:237771:272861	272861	274204	1344	Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome	sigma 54-dependent response regulator	4e-56	219
NC_007498:2475781:2496138	2496138	2497616	1479	Pelobacter carbinolicus DSM 2380, complete genome	two component signal transduction response regulator	3e-56	219
NC_010814:903199:920153	920153	921784	1632	Geobacter lovleyi SZ, complete genome	putative sigma54 specific transcriptional regulator	3e-56	219
NC_009483:2640403:2685135	2685135	2686535	1401	Geobacter uraniireducens Rf4 chromosome, complete genome	two component sigma-54 specific Fis family transcriptional regulator	3e-56	219
NC_014623:9363409:9378984	9378984	9380828	1845	Stigmatella aurantiaca DW4/3-1 chromosome, complete genome	Fis family sigma-54 dependent transcriptional regulator	3e-56	219
NC_014734:183214:203397	203397	204761	1365	Paludibacter propionicigenes WB4 chromosome, complete genome	two component, sigma54 specific, transcriptional regulator, fis family	3e-56	219
NC_011830:3081726:3081726	3081726	3083837	2112	Desulfitobacterium hafniense DCB-2, complete genome	PAS modulated sigma54 specific transcriptional regulator, Fis family	3e-56	219
NC_020210:2044944:2064037	2064037	2065407	1371	Geobacillus sp. GHH01, complete genome	signal-transduction and transcriptional-control protein	1e-55	218
NC_011894:3268850:3303332	3303332	3304702	1371	Methylobacterium nodulans ORS 2060, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	1e-55	218
NC_016584:4478200:4492305	4492305	4494179	1875	Desulfosporosinus orientis DSM 765 chromosome, complete genome	PAS domain-containing protein	1e-55	218
NC_010730:1211506:1213376	1213376	1214755	1380	Sulfurihydrogenibium sp. YO3AOP1, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	1e-55	218
NC_015711:7601733:7602883	7602883	7604202	1320	Myxococcus fulvus HW-1 chromosome, complete genome	sigma-54 dependent DNA-binding response regulator	1e-55	218
NC_014964:557910:568722	568722	570356	1635	Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, complete	PAS sensor protein	1e-55	218
NC_010321:562494:573700	573700	574941	1242	Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, complete	sigma-54 dependent trancsriptional regulator	1e-55	218
NC_017986:331610:356922	356922	358196	1275	Pseudomonas putida ND6 chromosome, complete genome	Fis family transcriptional regulator	1e-55	218
NC_011126:1241655:1241655	1241655	1242974	1320	Hydrogenobaculum sp. Y04AAS1, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	7e-56	218
NC_013851:3321853:3321853	3321853	3323220	1368	Allochromatium vinosum DSM 180 chromosome, complete genome	sigma54 specific transcriptional regulator, Fis family	7e-56	218
NC_013850:3340882:3359521	3359521	3361509	1989	Klebsiella variicola At-22 chromosome, complete genome	sigma54 specific transcriptional regulator, Fis family	7e-56	218
NC_009439:3104000:3104096	3104096	3105508	1413	Pseudomonas mendocina ymp, complete genome	two component, sigma54 specific, Fis family transcriptional regulator	2e-55	217
NC_010718:2385400:2387750	2387750	2389465	1716	Natranaerobius thermophilus JW/NM-WN-LF, complete genome	PAS modulated sigma54 specific transcriptional regulator, Fis family	2e-55	217
NC_012918:2277500:2300001	2300001	2301374	1374	Geobacter sp. M21 chromosome, complete genome	Fis family transcriptional regulator	2e-55	217
NC_014220:1269870:1275727	1275727	1277835	2109	Syntrophothermus lipocalidus DSM 12680 chromosome, complete genome	putative sigma54 specific transcriptional regulator	2e-55	217
NC_015850:1497998:1520348	1520348	1521691	1344	Acidithiobacillus caldus SM-1 chromosome, complete genome	two component sigma-54 specific Fis family transcriptional regulator	2e-55	217
NC_009454:1389974:1401202	1401202	1402908	1707	Pelotomaculum thermopropionicum SI, complete genome	transcriptional regulator	2e-55	217
NC_014931:6031645:6051030	6051030	6052385	1356	Variovorax paradoxus EPS chromosome, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	1e-55	217
NC_016803:198178:198178	198178	199581	1404	Desulfovibrio desulfuricans ND132 chromosome, complete genome	two component Fis family sigma54-specific transcriptional regulator	5e-55	216
NC_008095:3371673:3392717	3392717	3394516	1800	Myxococcus xanthus DK 1622, complete genome	sigma-54 dependent transcriptional regulator, Fis family	4e-55	216
NC_009092:2644164:2665963	2665963	2667486	1524	Shewanella loihica PV-4, complete genome	transcriptional regulator, Fis family	4e-55	216
NC_013730:5538323:5557446	5557446	5558816	1371	Spirosoma linguale DSM 74, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	4e-55	216
NC_008593:1797000:1803340	1803340	1804902	1563	Clostridium novyi NT, complete genome	transcriptional regulator	4e-55	216
NC_014377:1546124:1546124	1546124	1547512	1389	Thermosediminibacter oceani DSM 16646 chromosome, complete genome	PAS modulated sigma54 specific transcriptional regulator, Fis family	4e-55	216
NC_015436:1:11610	11610	13475	1866	Spirochaeta coccoides DSM 17374 chromosome, complete genome	sigma54 specific transcriptional regulator, Fis family	4e-55	216
NC_015519:924000:931668	931668	933236	1569	Tepidanaerobacter sp. Re1 chromosome, complete genome	Fis family PAS modulated sigma-54 specific transcriptional regulator	3e-55	216
NC_009454:489954:495825	495825	497261	1437	Pelotomaculum thermopropionicum SI, complete genome	transcriptional regulator	3e-55	216
NC_015711:8909256:8922607	8922607	8924031	1425	Myxococcus fulvus HW-1 chromosome, complete genome	sigma-54 dependent DNA-binding response regulator	3e-55	216
NC_008554:4781500:4793358	4793358	4794863	1506	Syntrophobacter fumaroxidans MPOB, complete genome	sigma54 specific transcriptional regulator, Fis family	3e-55	216
NC_016629:3496630:3513150	3513150	3514484	1335	Desulfovibrio africanus str. Walvis Bay chromosome, complete	two component, sigma54 specific, transcriptional regulator, Fis family	3e-55	216
NC_007517:1561466:1565515	1565515	1566891	1377	Geobacter metallireducens GS-15, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	7e-55	215
NC_015565:128350:153371	153371	155119	1749	Desulfotomaculum carboxydivorans CO-1-SRB chromosome, complete	putative sigma54 specific transcriptional regulator	6e-55	215
NC_020829:5174354:5222565	5222565	5223959	1395	Pseudomonas denitrificans ATCC 13867, complete genome	two-component response regulator	6e-55	215
NC_014328:2643588:2646788	2646788	2648716	1929	Clostridium ljungdahlii ATCC 49587 chromosome, complete genome	putative sigma-54-interacting transcriptional regulator	5e-55	215
NC_015722:462450:485318	485318	486565	1248	Candidatus Midichloria mitochondrii IricVA chromosome, complete	transcriptional regulator FlbD	2e-54	214
NC_007517:2241104:2277374	2277374	2278723	1350	Geobacter metallireducens GS-15, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	2e-54	214
NC_009615:1601170:1606354	1606354	1607703	1350	Parabacteroides distasonis ATCC 8503 chromosome, complete genome	two-component system response regulator	2e-54	214
NC_014733:107394:126015	126015	127163	1149	Methylovorus sp. MP688 chromosome, complete genome	sigma54 specific transcriptional regulator	2e-54	214
NC_017249:908500:947677	947677	949119	1443	Bradyrhizobium japonicum USDA 6, complete genome	transcriptional regulator	2e-54	214
NC_014972:2371647:2373659	2373659	2375056	1398	Desulfobulbus propionicus DSM 2032 chromosome, complete genome	Fis family two component sigma54 specific transcriptional regulator	2e-54	214
NC_014844:2721746:2751928	2751928	2753301	1374	Desulfovibrio aespoeensis Aspo-2 chromosome, complete genome	sigma-54 factor interaction domain-containing protein	1e-54	214
NC_014972:480355:491838	491838	493205	1368	Desulfobulbus propionicus DSM 2032 chromosome, complete genome	Fis family two component sigma54 specific transcriptional regulator	1e-54	214
NC_013892:202778:202778	202778	204208	1431	Xenorhabdus bovienii SS-2004 chromosome, complete genome	response regulator in two-component regulatory system with GlnL, nitrogen regulation (EBP family)	1e-54	214
NC_008228:3679949:3682648	3682648	3684081	1434	Pseudoalteromonas atlantica T6c, complete genome	sigma54 specific transcriptional regulator, Fis family	1e-54	214
NC_016147:730810:748290	748290	749972	1683	Pseudoxanthomonas spadix BD-a59 chromosome, complete genome	putative sigma-54 specific transcriptional regulator	3e-54	213
NC_009656:3733913:3735362	3735362	3736873	1512	Pseudomonas aeruginosa PA7 chromosome, complete genome	putative transcriptional regulator	3e-54	213
NC_008095:7139056:7159647	7159647	7161083	1437	Myxococcus xanthus DK 1622, complete genome	pilin regulatory protein PilR	4e-54	213
NC_014220:587826:591692	591692	593098	1407	Syntrophothermus lipocalidus DSM 12680 chromosome, complete genome	PAS modulated sigma54 specific transcriptional regulator, Fis family	4e-54	213
NC_009831:66518:87319	87319	88620	1302	Shewanella sediminis HAW-EB3, complete genome	sigma54 specific transcriptional regulator, fis family	4e-54	213
NC_014328:2643588:2659027	2659027	2660925	1899	Clostridium ljungdahlii ATCC 49587 chromosome, complete genome	putative sigma-54-interacting transcriptional regulator	3e-54	213
NC_008095:7139056:7152372	7152372	7153796	1425	Myxococcus xanthus DK 1622, complete genome	sigma-54 dependent DNA-binding response regulator	3e-54	213
NC_009483:2086021:2087611	2087611	2088990	1380	Geobacter uraniireducens Rf4 chromosome, complete genome	two component sigma-54 specific Fis family transcriptional regulator	3e-54	213
NC_013223:2609697:2643739	2643739	2645307	1569	Desulfohalobium retbaense DSM 5692, complete genome	transcriptional regulator, NifA subfamily, Fis Family	2e-54	213
NC_015850:1497998:1518163	1518163	1519140	978	Acidithiobacillus caldus SM-1 chromosome, complete genome	flagellar regulatory protein fleQ	2e-54	213
NC_009633:2137999:2140908	2140908	2142791	1884	Alkaliphilus metalliredigens QYMF chromosome, complete genome	sigma-54 dependent trancsriptional regulator	2e-54	213
NC_015379:2751342:2757021	2757021	2759012	1992	Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,	putative transcription factor, Fis family	2e-54	213
NC_015733:4253961:4256305	4256305	4257660	1356	Pseudomonas putida S16 chromosome, complete genome	two component sigma-54 specific Fis family transcriptional regulator	2e-54	213
NC_010814:1336943:1347744	1347744	1349300	1557	Geobacter lovleyi SZ, complete genome	putative phytochrome sensor protein	5e-54	212
NC_013889:2603914:2624094	2624094	2625431	1338	Thioalkalivibrio sp. K90mix chromosome, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	5e-54	212
NC_018604:838932:863077	863077	864417	1341	Brachyspira pilosicoli WesB complete genome	response regulatory protein AtoC	5e-54	212
NC_009439:3535152:3542972	3542972	3544684	1713	Pseudomonas mendocina ymp, complete genome	Fis family transcriptional regulator	5e-54	212
NC_013939:1417750:1417750	1417750	1419123	1374	Deferribacter desulfuricans SSM1, complete genome	two-component system, NtrC family, response regulator	4e-54	212
NC_010529:296500:312710	312710	314341	1632	Cupriavidus taiwanensis plasmid pRALTA, complete sequence	NifA transcriptional activator	1e-53	211
NC_011368:678291:691430	691430	692515	1086	Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG201,	Fis family transcriptional regulator	1e-53	211
NC_010162:5651746:5671116	5671116	5672606	1491	Sorangium cellulosum 'So ce 56', complete genome	hypothetical protein	1e-53	211
NC_013799:1012884:1033756	1033756	1035321	1566	Hydrogenobacter thermophilus TK-6, complete genome	Nif-specific regulatory protein	1e-53	211
NC_017161:1012874:1033746	1033746	1035311	1566	Hydrogenobacter thermophilus TK-6 chromosome, complete genome	Fis family NifA subfamily transcriptional regulator	1e-53	211
NC_013730:58840:72173	72173	73513	1341	Spirosoma linguale DSM 74, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	1e-53	211
NC_021182:380500:394347	394347	396098	1752	Clostridium pasteurianum BC1, complete genome	transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains	1e-53	211
NC_012108:1664341:1682450	1682450	1683961	1512	Desulfobacterium autotrophicum HRM2, complete genome	sigma-54 dependent transcriptional regulator	9e-54	211
NC_016584:3040887:3058001	3058001	3060124	2124	Desulfosporosinus orientis DSM 765 chromosome, complete genome	transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains	9e-54	211
NC_017179:1239991:1254484	1254484	1256484	2001	Clostridium difficile BI1, complete genome	sigma-54 dependent transcriptional regulator	7e-54	211
NC_013315:1230214:1244706	1244706	1246706	2001	Clostridium difficile CD196 chromosome, complete genome	sigma-54 dependent transcriptional regulator	7e-54	211
NC_013316:1225797:1242323	1242323	1244323	2001	Clostridium difficile R20291, complete genome	putative sigma-54 dependent transcriptional regulator	7e-54	211
NC_008577:2402165:2405533	2405533	2407014	1482	Shewanella sp. ANA-3 chromosome 1, complete sequence	two component, sigma54 specific, transcriptional regulator, Fis family	8e-54	211
NC_011146:2916223:2923267	2923267	2924796	1530	Geobacter bemidjiensis Bem, complete genome	transcriptional regulator, NifA subfamily, Fis Family	9e-54	211
NC_009092:1504363:1570438	1570438	1571871	1434	Shewanella loihica PV-4, complete genome	sigma54 specific transcriptional regulator, Fis family	9e-54	211
NC_010520:2668702:2687142	2687142	2688896	1755	Clostridium botulinum A3 str. Loch Maree, complete genome	sensory box sigma-54 dependent transcriptional regulator	2e-53	210
NC_015945:218326:220284	220284	221612	1329	Muricauda ruestringensis DSM 13258 chromosome, complete genome	two component sigma-54 specific Fis family transcriptional regulator	2e-53	210
NC_009698:2450606:2469060	2469060	2470814	1755	Clostridium botulinum A str. Hall chromosome, complete genome	sensory box sigma-54 dependent transcriptional regulator	2e-53	210
NC_009697:2478261:2496715	2496715	2498469	1755	Clostridium botulinum A str. ATCC 19397 chromosome, complete	sensory box sigma-54 dependent transcriptional regulator	2e-53	210
NC_009495:2606238:2624598	2624598	2626352	1755	Clostridium botulinum A str. ATCC 3502 chromosome, complete genome	sensory box sigma-54 dependent transcriptional regulator	2e-53	210
NC_015167:864525:880273	880273	881553	1281	Cellulophaga lytica DSM 7489 chromosome, complete genome	sigma54 specific transcriptional regulator, Fis family	2e-53	210
NC_016593:2447938:2450106	2450106	2452175	2070	Geobacillus thermoleovorans CCB_US3_UF5 chromosome, complete	Sensory box sigma-54 dependent DNA-binding response regulator	2e-53	210
NC_012563:2761570:2798983	2798983	2800737	1755	Clostridium botulinum A2 str. Kyoto, complete genome	sensory box sigma-54 dependent transcriptional regulator	2e-53	210
NC_010516:2594159:2612644	2612644	2614398	1755	Clostridium botulinum B1 str. Okra, complete genome	sensory box sigma-54 dependent transcriptional regulator	2e-53	210
NC_009699:2654672:2672963	2672963	2674717	1755	Clostridium botulinum F str. Langeland chromosome, complete genome	sensory box sigma-54 dependent transcriptional regulator	2e-53	210
NC_017297:2635892:2673112	2673112	2674866	1755	Clostridium botulinum F str. 230613 chromosome, complete genome	sensory box sigma-54 dependent transcriptional regulator	2e-53	210
NC_013939:724469:740763	740763	742055	1293	Deferribacter desulfuricans SSM1, complete genome	two-component system, NtrC family, response regulator AtoC	2e-53	210
NC_012658:2641446:2680027	2680027	2681781	1755	Clostridium botulinum Ba4 str. 657 chromosome, complete genome	sensory box sigma-54 dependent transcriptional regulator	2e-53	210
NC_011770:3735162:3735162	3735162	3736490	1329	Pseudomonas aeruginosa LESB58, complete genome	putative transcriptional regulator	2e-53	210
NC_009089:3782000:3784804	3784804	3786579	1776	Clostridium difficile 630, complete genome	putative sigma-54 interacting protein	2e-53	210
NC_004557:558500:574841	574841	576571	1731	Clostridium tetani E88, complete genome	signal-transduction and transcriptional-control protein	2e-53	210
NC_017179:3621306:3621306	3621306	3623081	1776	Clostridium difficile BI1, complete genome	sigma-54 interacting protein	2e-53	210
NC_013315:3613288:3613288	3613288	3615063	1776	Clostridium difficile CD196 chromosome, complete genome	sigma-54 interacting protein	2e-53	210
NC_008593:2020473:2034360	2034360	2036339	1980	Clostridium novyi NT, complete genome	aco operon expression regulatory protein	2e-53	210
NC_008463:3503576:3503576	3503576	3504904	1329	Pseudomonas aeruginosa UCBPP-PA14, complete genome	putative sigma-54 dependent transcriptional regulator	5e-53	209
NC_010674:658596:663758	663758	665713	1956	Clostridium botulinum B str. Eklund 17B, complete genome	aco operon expression regulatory protein	5e-53	209
NC_017195:3919000:3950394	3950394	3951776	1383	Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, complete	arginine utilization regulatory protein RocR	5e-53	209
NC_012968:239476:266114	266114	267535	1422	Methylotenera mobilis JLW8, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	5e-53	209
NC_018868:1960542:1964940	1964940	1966301	1362	Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome	putative PEP-CTERM system response regulator	5e-53	209
NC_017191:3841170:3866322	3866322	3867830	1509	Bacillus amyloliquefaciens XH7 chromosome, complete genome	NtrC/NifA family transcriptional regulator	5e-53	209
NC_017188:3839478:3864630	3864630	3866138	1509	Bacillus amyloliquefaciens TA208 chromosome, complete genome	transcriptional regulator (NtrC/NifA family) protein	5e-53	209
NC_015573:330966:338932	338932	340857	1926	Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genome	proprionate catabolism activator, Fis family	5e-53	209
NC_018080:5192264:5196396	5196396	5197733	1338	Pseudomonas aeruginosa DK2 chromosome, complete genome	two-component response regulator PilR	5e-53	209
NC_003909:3941282:3952356	3952356	3954428	2073	Bacillus cereus ATCC 10987, complete genome	sensory box sigma-54 dependent DNA-binding response regulator	5e-53	209
NC_016589:183432:185454	185454	186794	1341	Burkholderia sp. YI23 chromosome 1, complete sequence	two component Fis family sigma54-specific transcriptional regulator	4e-53	209
NC_015587:90539:90539	90539	92098	1560	Hydrogenobaculum sp. SHO chromosome, complete genome	PAS modulated sigma54 specific transcriptional regulator, Fis family	4e-53	209
NC_020411:90538:90538	90538	92097	1560	Hydrogenobaculum sp. HO, complete genome	PAS modulated sigma54 specific transcriptional regulator, Fis family	4e-53	209
NC_009138:668000:671513	671513	673165	1653	Herminiimonas arsenicoxydans, complete genome	putative sigma-54 dependent transcriptional regulator	3e-53	209
NC_018080:3448392:3448392	3448392	3449720	1329	Pseudomonas aeruginosa DK2 chromosome, complete genome	transcriptional regulator	3e-53	209
NC_008228:4696338:4696338	4696338	4698110	1773	Pseudoalteromonas atlantica T6c, complete genome	transcriptional regulator, Fis family	3e-53	209
NC_002516:2113186:2129307	2129307	2130635	1329	Pseudomonas aeruginosa PAO1, complete genome	probable transcriptional regulator	3e-53	209
NC_008346:331820:366580	366580	368328	1749	Syntrophomonas wolfei subsp. wolfei str. Goettingen, complete	hypothetical protein	3e-53	209
NC_009439:1075170:1089656	1089656	1090996	1341	Pseudomonas mendocina ymp, complete genome	two-component response regulator PilR	3e-53	209
NC_016047:4108910:4141540	4141540	4142928	1389	Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, complete	arginine utilization regulatory protein RocR	3e-53	209
NC_014355:220002:238607	238607	240403	1797	Candidatus Nitrospira defluvii, complete genome	sigma-54 dependent response regulator	3e-53	209
NC_016584:4325964:4345737	4345737	4347833	2097	Desulfosporosinus orientis DSM 765 chromosome, complete genome	PAS domain-containing protein	3e-53	209
NC_015557:90503:90503	90503	92062	1560	Hydrogenobaculum sp. 3684 chromosome, complete genome	PAS modulated sigma54 specific transcriptional regulator, Fis family	4e-53	209
NC_008463:5364428:5367452	5367452	5368789	1338	Pseudomonas aeruginosa UCBPP-PA14, complete genome	two-component response regulator PilR	7e-53	208
NC_009698:3275839:3276882	3276882	3278510	1629	Clostridium botulinum A str. Hall chromosome, complete genome	sigma-54 dependent transcriptional regulator	7e-53	208
NC_010511:1351000:1376832	1376832	1378190	1359	Methylobacterium sp. 4-46 chromosome, complete genome	two component sigma-54 specific Fis family transcriptional regulator	9e-53	208
NC_020541:3156500:3186067	3186067	3187428	1362	Rhodanobacter sp. 2APBS1, complete genome	PEP-CTERM-box response regulator transcription factor	9e-53	208
NC_014654:646500:663377	663377	665302	1926	Halanaerobium sp. 'sapolanicus' chromosome, complete genome	proprionate catabolism activator, Fis family	1e-52	208
NC_007503:1111457:1116505	1116505	1118397	1893	Carboxydothermus hydrogenoformans Z-2901, complete genome	sigma-54 dependent transcriptional regulator	7e-53	208
NC_016745:2913712:2913712	2913712	2915040	1329	Oceanimonas sp. GK1 chromosome, complete genome	Fis family transcriptional regulator	7e-53	208
NC_014915:1909275:1951739	1951739	1953127	1389	Geobacillus sp. Y412MC52 chromosome, complete genome	PAS modulated sigma54 specific transcriptional regulator, Fis family	7e-53	208
NC_013411:2767400:2811803	2811803	2813191	1389	Geobacillus sp. Y412MC61, complete genome	PAS modulated sigma54 specific transcriptional regulator, Fis family	7e-53	208
NC_015563:4629436:4650664	4650664	4652196	1533	Delftia sp. Cs1-4 chromosome, complete genome	sigma54 specific Fis family transcriptional regulator	7e-53	208
NC_011565:190406:200111	200111	201337	1227	Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,	sigma-54-dependent transcriptional regulator	6e-53	208
NC_014916:22644:37562	37562	39481	1920	Geobacillus sp. Y412MC52 plasmid pGYMC5201, complete sequence	proprionate catabolism activator, Fis family	6e-53	208
NC_013412:33834:37251	37251	39170	1920	Geobacillus sp. Y412MC61 plasmid pGYMC6101, complete sequence	proprionate catabolism activator, Fis family	6e-53	208
NC_016791:1980844:1999648	1999648	2001015	1368	Clostridium sp. BNL1100 chromosome, complete genome	PAS domain-containing protein	2e-52	207
NC_015410:1144272:1157713	1157713	1159053	1341	Pseudomonas mendocina NK-01 chromosome, complete genome	two-component response regulator PilR	2e-52	207
NC_007963:1190847:1202815	1202815	1204230	1416	Chromohalobacter salexigens DSM 3043, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	2e-52	207
NC_014335:3902155:3913065	3913065	3915137	2073	Bacillus cereus biovar anthracis str. CI chromosome, complete	sensory box sigma-54 dependent DNA-binding response regulator	2e-52	207
NC_011969:3879412:3893517	3893517	3895589	2073	Bacillus cereus Q1 chromosome, complete genome	sensory box sigma-54 dependent DNA-binding response regulator	2e-52	207
NC_015573:162000:166390	166390	168471	2082	Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genome	Fis family PAS modulated sigma-54 specific transcriptional regulator	2e-52	207
NC_015733:4253961:4259782	4259782	4261257	1476	Pseudomonas putida S16 chromosome, complete genome	sigma-54 dependent transcription regulator	2e-52	207
NC_015144:545999:563002	563002	564261	1260	Weeksella virosa DSM 16922 chromosome, complete genome	Fis family transcriptional regulator	2e-52	207
NC_014377:1400544:1419882	1419882	1421429	1548	Thermosediminibacter oceani DSM 16646 chromosome, complete genome	sigma54 specific transcriptional regulator with PAS/PAC sensor, Fis family	2e-52	207
NC_015572:1421782:1436886	1436886	1438259	1374	Methylomonas methanica MC09 chromosome, complete genome	Fis family two component sigma-54 specific transcriptional regulator	1e-52	207
NC_004578:2797493:2815564	2815564	2817093	1530	Pseudomonas syringae pv. tomato str. DC3000, complete genome	sigma-54 dependent transcriptional regulator	1e-52	207
NC_012793:2337776:2357742	2357742	2359808	2067	Geobacillus sp. WCH70, complete genome	PAS modulated sigma54 specific transcriptional regulator, Fis family	1e-52	207
NC_010557:316000:335836	335836	336966	1131	Burkholderia ambifaria MC40-6 chromosome 3, complete sequence	putative sigma54 specific transcriptional regulator	1e-52	207
NC_010520:2171584:2180905	2180905	2182800	1896	Clostridium botulinum A3 str. Loch Maree, complete genome	aor transcriptional regulator	1e-52	207
NC_008321:3189974:3192357	3192357	3193766	1410	Shewanella sp. MR-4, complete genome	sigma54 specific transcriptional regulator, Fis family	1e-52	207
NC_005945:3992600:4004042	4004042	4006114	2073	Bacillus anthracis str. Sterne, complete genome	sensory box sigma-54 dependent DNA-binding response regulator	4e-52	206
NC_006274:4031246:4041786	4041786	4043858	2073	Bacillus cereus E33L, complete genome	sensory box sigma-54 dependent DNA-binding response regulator	4e-52	206
NC_009699:2116500:2121467	2121467	2123362	1896	Clostridium botulinum F str. Langeland chromosome, complete genome	aor transcriptional regulator	4e-52	206
NC_009656:2801885:2839287	2839287	2840822	1536	Pseudomonas aeruginosa PA7 chromosome, complete genome	transcriptional regulator	4e-52	206
NC_005957:3975192:3990147	3990147	3992219	2073	Bacillus thuringiensis serovar konkukian str. 97-27, complete	sensory box sigma-54 dependent DNA-binding response regulator	4e-52	206
NC_007912:2768363:2786848	2786848	2788341	1494	Saccharophagus degradans 2-40, complete genome	diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)	4e-52	206
NC_012491:1293086:1298004	1298004	1299371	1368	Brevibacillus brevis NBRC 100599, complete genome	putative transcriptional regulator protein	5e-52	206
NC_016779:3913627:3925073	3925073	3927145	2073	Bacillus cereus F837/76 chromosome, complete genome	Transcriptional regulator BkdR	5e-52	206
NC_011773:3982008:3995893	3995893	3997965	2073	Bacillus cereus AH820 chromosome, complete genome	sensory box sigma-54 dependent DNA-binding response regulator	5e-52	206
NC_008600:3976045:3989942	3989942	3992014	2073	Bacillus thuringiensis str. Al Hakam, complete genome	sensory box sigma-54 dependent DNA-binding response regulator	5e-52	206
NC_014328:4387303:4391932	4391932	4393746	1815	Clostridium ljungdahlii ATCC 49587 chromosome, complete genome	putative transcriptional regulator	5e-52	206
NC_014206:2941575:2950934	2950934	2952388	1455	Geobacillus sp. C56-T3 chromosome, complete genome	Fis family two component sigma-54 specific transcriptional regulator	5e-52	206
NC_003997:3993223:4003543	4003543	4005615	2073	Bacillus anthracis str. Ames, complete genome	sensory box sigma-54 dependent DNA-binding response regulator	4e-52	206
NC_007530:3992228:4003670	4003670	4005742	2073	Bacillus anthracis str. 'Ames Ancestor', complete genome	sensory box sigma-54 dependent dna-binding response regulator	4e-52	206
NC_012659:3992684:4003570	4003570	4005642	2073	Bacillus anthracis str. A0248, complete genome	sensory box sigma-54 dependent DNA-binding response regulator	4e-52	206
NC_012489:652319:678909	678909	680399	1491	Gemmatimonas aurantiaca T-27, complete genome	NtrC family two-component response regulator	2e-52	206
NC_010516:2064027:2071399	2071399	2073294	1896	Clostridium botulinum B1 str. Okra, complete genome	aor transcriptional regulator	2e-52	206
NC_009495:1759759:1765651	1765651	1767603	1953	Clostridium botulinum A str. ATCC 3502 chromosome, complete genome	signal-transduction and transcriptional-control protein	2e-52	206
NC_014479:3939183:3968301	3968301	3969686	1386	Bacillus subtilis subsp. spizizenii str. W23 chromosome, complete	NtrC/NifA family transcriptional regulator	2e-52	206
NC_015556:4118304:4122397	4122397	4123734	1338	Pseudomonas fulva 12-X chromosome, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	2e-52	206
NC_020291:744329:752326	752326	754227	1902	Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome	Aor transcriptional regulator	3e-52	206
NC_010723:622928:628951	628951	630906	1956	Clostridium botulinum E3 str. Alaska E43, complete genome	signal-transduction and transcriptional-control protein	3e-52	206
NC_011901:2466360:2472136	2472136	2473497	1362	Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete	response regulator receiver protein	3e-52	206
NC_008593:2136759:2153232	2153232	2155127	1896	Clostridium novyi NT, complete genome	Signal-transduction and transcriptional-control protein	3e-52	206
NC_003212:2293425:2295238	2295238	2296605	1368	Listeria innocua Clip11262, complete genome	hypothetical protein	3e-52	206
NC_014365:3123853:3147082	3147082	3148809	1728	Desulfarculus baarsii DSM 2075 chromosome, complete genome	PAS modulated sigma54 specific transcriptional regulator, Fis family	3e-52	206
NC_013222:1659619:1659619	1659619	1660944	1326	Robiginitalea biformata HTCC2501, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family protein	4e-52	206
NC_004193:2692136:2696035	2696035	2697435	1401	Oceanobacillus iheyensis HTE831, complete genome	transcriptional regulator	6e-52	205
NC_006510:746814:756656	756656	758110	1455	Geobacillus kaustophilus HTA426, complete genome	transcriptional regulator	6e-52	205
NC_019842:3852062:3879639	3879639	3881042	1404	Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,	hypothetical protein	7e-52	205
NC_009725:3809403:3835491	3835491	3836894	1404	Bacillus amyloliquefaciens FZB42, complete genome	RocR	7e-52	205
NC_011660:366000:383836	383836	385203	1368	Listeria monocytogenes HCC23 chromosome, complete genome	sigma-54 dependent transcriptional regulator	8e-52	205
NC_008228:3679949:3679949	3679949	3681292	1344	Pseudoalteromonas atlantica T6c, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	6e-52	205
NC_021184:657093:661997	661997	663964	1968	Desulfotomaculum gibsoniae DSM 7213, complete genome	transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains	6e-52	205
NC_009698:1985404:1992181	1992181	1994076	1896	Clostridium botulinum A str. Hall chromosome, complete genome	aor transcriptional regulator	5e-52	205
NC_009697:1985187:1991964	1991964	1993859	1896	Clostridium botulinum A str. ATCC 19397 chromosome, complete	aor transcriptional regulator	5e-52	205
NC_009495:2056546:2063323	2063323	2065218	1896	Clostridium botulinum A str. ATCC 3502 chromosome, complete genome	aor transcriptional regulator	5e-52	205
NC_012563:2203037:2209814	2209814	2211709	1896	Clostridium botulinum A2 str. Kyoto, complete genome	aor transcriptional regulator	5e-52	205
NC_016593:762216:771978	771978	773432	1455	Geobacillus thermoleovorans CCB_US3_UF5 chromosome, complete	Two component, sigma54 specific, transcriptional regulator, Fis	6e-52	205
NC_008577:2402165:2419269	2419269	2420771	1503	Shewanella sp. ANA-3 chromosome 1, complete sequence	response regulator receiver protein	1e-51	204
NC_018080:2732962:2749373	2749373	2750908	1536	Pseudomonas aeruginosa DK2 chromosome, complete genome	transcriptional regulator	1e-51	204
NC_002516:2750128:2750128	2750128	2751663	1536	Pseudomonas aeruginosa PAO1, complete genome	probable transcriptional regulator	1e-51	204
NC_002937:614000:634415	634415	635995	1581	Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete	sigma-54 dependent transcriptional regulator	1e-51	204
NC_017506:1996652:1996652	1996652	1997974	1323	Marinobacter adhaerens HP15 chromosome, complete genome	two component Fis family sigma54-specific transcriptional regulator	1e-51	204
NC_008752:2056547:2059797	2059797	2061218	1422	Acidovorax avenae subsp. citrulli AAC00-1, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	1e-51	204
NC_010516:3466000:3472108	3472108	3473736	1629	Clostridium botulinum B1 str. Okra, complete genome	sigma-54 dependent transcriptional regulator	2e-51	204
NC_013223:685628:689958	689958	691427	1470	Desulfohalobium retbaense DSM 5692, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	2e-51	204
NC_008751:2774000:2778591	2778591	2780210	1620	Desulfovibrio vulgaris subsp. vulgaris DP4, complete genome	sigma54 specific transcriptional regulator, Fis family	2e-51	204
NC_021184:3571014:3596091	3596091	3597533	1443	Desulfotomaculum gibsoniae DSM 7213, complete genome	response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains	2e-51	204
NC_005945:467427:485870	485870	487273	1404	Bacillus anthracis str. Sterne, complete genome	arginine utilization regulatory protein RocR	1e-51	204
NC_007530:467993:485827	485827	487230	1404	Bacillus anthracis str. 'Ames Ancestor', complete genome	arginine utilization regulatory protein rocr	1e-51	204
NC_003997:467993:485827	485827	487230	1404	Bacillus anthracis str. Ames, complete genome	arginine utilization regulatory protein RocR	1e-51	204
NC_014206:1745203:1770563	1770563	1772263	1701	Geobacillus sp. C56-T3 chromosome, complete genome	Fis family PAS modulated sigma-54 specific transcriptional regulator	9e-52	204
NC_020410:3801583:3828192	3828192	3829607	1416	Bacillus amyloliquefaciens subsp. plantarum UCMB5036 complete	transcriptional regulator (NtrC/NifA family)	9e-52	204
NC_019902:3644000:3655279	3655279	3656769	1491	Thioalkalivibrio nitratireducens DSM 14787, complete genome	sigma-54 dependent transcriptional regulator	9e-52	204
NC_017179:446564:459343	459343	460974	1632	Clostridium difficile BI1, complete genome	sigma-54-dependent transcriptional regulator	1e-51	204
NC_013315:435599:449780	449780	451411	1632	Clostridium difficile CD196 chromosome, complete genome	sigma-54-dependent transcriptional regulator	1e-51	204
NC_008255:3285561:3293378	3293378	3294727	1350	Cytophaga hutchinsonii ATCC 33406, complete genome	two-component response regulator	1e-51	204
NC_014394:1815638:1820663	1820663	1822033	1371	Gallionella capsiferriformans ES-2 chromosome, complete genome	putative two component, sigma54 specific, transcriptional regulator, Fis family	1e-51	204
NC_018870:115982:128693	128693	130804	2112	Thermacetogenium phaeum DSM 12270 chromosome, complete genome	sigma54 specific transcriptional regulator	1e-51	204
NC_015376:3249773:3263451	3263451	3264824	1374	Burkholderia gladioli BSR3 chromosome chromosome 2, complete	Sigma-54 dependent DNA-binding response regulator	1e-51	204
NC_012659:467893:485727	485727	487130	1404	Bacillus anthracis str. A0248, complete genome	arginine utilization regulatory protein RocR	1e-51	204
NC_009674:2923707:2934249	2934249	2936321	2073	Bacillus cytotoxicus NVH 391-98 chromosome, complete genome	sigma-54 dependent trancsriptional regulator	3e-51	203
NC_002937:2933000:2934393	2934393	2935814	1422	Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete	sigma-54 dependent transcriptional regulator	3e-51	203
NC_015519:426948:430039	430039	431607	1569	Tepidanaerobacter sp. Re1 chromosome, complete genome	Fis family sigma-54 specific transcriptional regulator	3e-51	203
NC_020291:2291418:2294109	2294109	2295833	1725	Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome	PAS domain-containing S-box protein	2e-51	203
NC_008751:607209:622757	622757	624178	1422	Desulfovibrio vulgaris subsp. vulgaris DP4, complete genome	sigma54 specific transcriptional regulator, Fis family	2e-51	203
NC_010814:1390817:1412795	1412795	1414183	1389	Geobacter lovleyi SZ, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	2e-51	203
NC_007907:5404608:5405521	5405521	5406681	1161	Desulfitobacterium hafniense Y51, complete genome	hypothetical protein	2e-51	203
NC_002950:155873:169744	169744	170997	1254	Porphyromonas gingivalis W83, complete genome	sigma-54-dependent transcriptional regulator	5e-51	202
NC_008228:3608909:3624746	3624746	3626302	1557	Pseudoalteromonas atlantica T6c, complete genome	transcriptional regulator, TyrR	5e-51	202
NC_004663:4928333:4942909	4942909	4944282	1374	Bacteroides thetaiotaomicron VPI-5482, complete genome	rteB, two-component system response regulator	5e-51	202
NC_010321:1703000:1713901	1713901	1715778	1878	Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, complete	sigma-54 dependent trancsriptional regulator	6e-51	202
NC_014964:1695000:1706114	1706114	1707991	1878	Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, complete	PAS sensor protein	6e-51	202
NC_014328:773095:788542	788542	789957	1416	Clostridium ljungdahlii ATCC 49587 chromosome, complete genome	putative transcriptional regulator	6e-51	202
NC_009715:1470419:1498913	1498913	1500214	1302	Campylobacter curvus 525.92 chromosome, complete genome	putative alkyl-dihydroxyacetone phosphate synthase	6e-51	202
NC_007510:3340008:3366966	3366966	3368321	1356	Burkholderia sp. 383 chromosome 1, complete sequence	two component, sigma54 specific, transcriptional regulator, Fis family	6e-51	202
NC_013851:859396:865935	865935	867314	1380	Allochromatium vinosum DSM 180 chromosome, complete genome	sigma54 specific transcriptional regulator, Fis family	5e-51	202
NC_016510:2750354:2763853	2763853	2765112	1260	Flavobacterium columnare ATCC 49512 chromosome, complete genome	sigma-54 dependent transcription regulator	4e-51	202
NC_010505:400950:404448	404448	405803	1356	Methylobacterium radiotolerans JCM 2831, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	3e-51	202
NC_011772:4125996:4138399	4138399	4140471	2073	Bacillus cereus G9842, complete genome	sensory box sigma-54 dependent DNA-binding response regulator	3e-51	202
NC_015388:719669:738350	738350	739444	1095	Desulfobacca acetoxidans DSM 11109 chromosome, complete genome	Sigma 54 interacting domain protein	3e-51	202
NC_013223:1090397:1107118	1107118	1108503	1386	Desulfohalobium retbaense DSM 5692, complete genome	putative two component, sigma54 specific, transcriptional regulator, Fis family	3e-51	202
NC_012438:1514376:1520710	1520710	1522020	1311	Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genome	sigma-54 interaction domain family protein	3e-51	202
NC_017208:4166008:4176550	4176550	4178622	2073	Bacillus thuringiensis serovar chinensis CT-43 chromosome, complete	sigma-54-dependent transcriptional activator	4e-51	202
NC_011768:5631288:5653482	5653482	5655071	1590	Desulfatibacillum alkenivorans AK-01, complete genome	transcriptional regulator, NifA subfamily, Fis Family	4e-51	202
NC_012108:2305327:2310381	2310381	2311739	1359	Desulfobacterium autotrophicum HRM2, complete genome	sigma-54 dependent two component DNA-binding response regulator (Fis family protein)	4e-51	202
NC_016631:4423658:4448122	4448122	4449585	1464	Granulicella mallensis MP5ACTX8 chromosome, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	1e-50	201
NC_016616:134449:154505	154505	155911	1407	Dechlorosoma suillum PS chromosome, complete genome	response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains	1e-50	201
NC_013132:1165218:1188122	1188122	1189591	1470	Chitinophaga pinensis DSM 2588, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	1e-50	201
NC_011901:2739984:2760863	2760863	2762224	1362	Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete	Fis family transcriptional regulator	1e-50	201
NC_016803:1027017:1037668	1037668	1039200	1533	Desulfovibrio desulfuricans ND132 chromosome, complete genome	sigma-54 interacting domain-containing protein	1e-50	201
NC_015873:380485:400351	400351	401814	1464	Megasphaera elsdenii DSM 20460, complete genome	PAS domain S-box	1e-50	201
NC_010729:265791:279594	279594	280847	1254	Porphyromonas gingivalis ATCC 33277, complete genome	sigma-54-dependent transcriptional regulator	1e-50	201
NC_006510:1995916:1995916	1995916	1997685	1770	Geobacillus kaustophilus HTA426, complete genome	transcriptional regulator	1e-50	201
NC_008340:774206:789573	789573	790982	1410	Alkalilimnicola ehrlichei MLHE-1, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	9e-51	201
NC_014960:1887000:1895407	1895407	1896576	1170	Anaerolinea thermophila UNI-1, complete genome	putative two-component response regulator receiver protein	8e-51	201
NC_014972:2503107:2515974	2515974	2518379	2406	Desulfobulbus propionicus DSM 2032 chromosome, complete genome	PAS modulated Fis family sigma-54 specific transcriptional regulator	8e-51	201
NC_012912:483390:489756	489756	491357	1602	Dickeya zeae Ech1591, complete genome	Sigma 54 interacting domain protein	8e-51	201
NC_006177:2211458:2225941	2225941	2227335	1395	Symbiobacterium thermophilum IAM 14863, complete genome	sigma-54-dependent transcriptional regulator	9e-51	201
NC_015573:2900906:2926688	2926688	2928670	1983	Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genome	GAF modulated Fis family sigma54 specific transcriptional regulator	9e-51	201
NC_007484:293763:302493	302493	303521	1029	Nitrosococcus oceani ATCC 19707, complete genome	Sigma-54 specific transcriptional regulator, Fis famliy	9e-51	201
NC_009439:4404942:4428423	4428423	4429883	1461	Pseudomonas mendocina ymp, complete genome	sigma-54 dependent trancsriptional regulator	9e-51	201
NC_014098:2971011:2973339	2973339	2974793	1455	Bacillus tusciae DSM 2912 chromosome, complete genome	putative sigma54 specific transcriptional regulator	3e-50	200
NC_004722:4117459:4128000	4128000	4130072	2073	Bacillus cereus ATCC 14579, complete genome	Sigma-54-dependent transcriptional activator	2e-50	200
NC_013921:80856:83179	83179	84738	1560	Thermoanaerobacter italicus Ab9 chromosome, complete genome	putative sigma54 specific transcriptional regulator	2e-50	200
NC_015681:1201926:1208514	1208514	1210274	1761	Thermodesulfatator indicus DSM 15286 chromosome, complete genome	Fis Family NifA subfamily transcriptional regulator	2e-50	200
NC_012108:1324885:1338915	1338915	1340306	1392	Desulfobacterium autotrophicum HRM2, complete genome	putative response regulator protein	2e-50	200
NC_011725:4159000:4170157	4170157	4172271	2115	Bacillus cereus B4264 chromosome, complete genome	sensory box sigma-54 dependent DNA-binding response regulator	2e-50	200
NC_009617:2355662:2368633	2368633	2370339	1707	Clostridium beijerinckii NCIMB 8052 chromosome, complete genome	sigma-54 dependent trancsriptional regulator	2e-50	200
NC_009720:2424975:2443307	2443307	2444800	1494	Xanthobacter autotrophicus Py2, complete genome	two component, sigma54 specific, Fis family transcriptional regulator	2e-50	200
NC_014171:4039120:4050725	4050725	4052797	2073	Bacillus thuringiensis BMB171 chromosome, complete genome	sigma-54-dependent transcriptional activator	2e-50	200
NC_013960:1587761:1618948	1618948	1619937	990	Nitrosococcus halophilus Nc4 chromosome, complete genome	sigma-54 factor interaction domain-containing protein	2e-50	200
NC_020156:903754:910772	910772	912076	1305	Nonlabens dokdonensis DSW-6, complete genome	transcriptional regulator, sigma-54 dependent	2e-50	200
NC_015571:440605:454475	454475	455734	1260	Porphyromonas gingivalis TDC60, complete genome	sigma-54-dependent transcriptional regulator	2e-50	200
NC_010995:3821327:3828504	3828504	3829907	1404	Cellvibrio japonicus Ueda107, complete genome	PilR	2e-50	200
NC_007645:2779381:2826308	2826308	2827639	1332	Hahella chejuensis KCTC 2396, complete genome	acetoacetate metabolism regulatory protein AtoC (sigma 54-dependent transcriptional regulator)	4e-50	199
NC_015425:2389400:2409757	2409757	2411652	1896	Clostridium botulinum BKT015925 chromosome, complete genome	sensory box sigma-54 dependent transcriptional regulator	5e-50	199
NC_014964:2199252:2217988	2217988	2219547	1560	Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, complete	sigma-54 factor interaction domain-containing protein	5e-50	199
NC_007298:750361:752075	752075	753439	1365	Dechloromonas aromatica RCB, complete genome	Helix-turn-helix, Fis-type	5e-50	199
NC_014206:1618988:1641271	1641271	1642980	1710	Geobacillus sp. C56-T3 chromosome, complete genome	Fis family PAS modulated sigma-54 specific transcriptional regulator	6e-50	199
NC_021184:3841172:3871315	3871315	3873315	2001	Desulfotomaculum gibsoniae DSM 7213, complete genome	transcriptional activator of acetoin/glycerol metabolism	4e-50	199
NC_007645:5160133:5185296	5185296	5186795	1500	Hahella chejuensis KCTC 2396, complete genome	sigma 54-dependent transcriptional activator	4e-50	199
NC_010184:4021688:4035572	4035572	4037644	2073	Bacillus weihenstephanensis KBAB4, complete genome	PAS modulated sigma54 specific transcriptional regulator, Fis family	4e-50	199
NC_015703:3842144:3859253	3859253	3860608	1356	Runella slithyformis DSM 19594 chromosome, complete genome	Fis family two component sigma-54 specific transcriptional regulator	3e-50	199
NC_016584:3040887:3055879	3055879	3057978	2100	Desulfosporosinus orientis DSM 765 chromosome, complete genome	PAS domain-containing protein	3e-50	199
NC_009937:3324793:3342477	3342477	3344420	1944	Azorhizobium caulinodans ORS 571, complete genome	sigma54 specific transcriptional regulator	3e-50	199
NC_009943:1499111:1499111	1499111	1500622	1512	Candidatus Desulfococcus oleovorans Hxd3, complete genome	putative sigma54 specific transcriptional regulator	3e-50	199
NC_014614:2333890:2346026	2346026	2347780	1755	Clostridium sticklandii, complete genome	Sigma-54-dependent transcriptional activator	3e-50	199
NC_011662:386162:405703	405703	407043	1341	Thauera sp. MZ1T, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	1e-49	198
NC_007298:2769525:2784466	2784466	2785872	1407	Dechloromonas aromatica RCB, complete genome	Helix-turn-helix, Fis-type	1e-49	198
NC_008321:1993541:2011679	2011679	2013223	1545	Shewanella sp. MR-4, complete genome	sigma54 specific transcriptional regulator, Fis family	9e-50	198
NC_019978:1182056:1188670	1188670	1190517	1848	Halobacteroides halobius DSM 5150, complete genome	PAS domain S-box	8e-50	198
NC_009138:467268:486934	486934	488298	1365	Herminiimonas arsenicoxydans, complete genome	AoxR regulatory protein	7e-50	198
NC_018870:115982:165663	165663	167618	1956	Thermacetogenium phaeum DSM 12270 chromosome, complete genome	sigma54 specific transcriptional regulator	7e-50	198
NC_008757:111292:126975	126975	128513	1539	Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, complete	sigma-54 factor, interaction domain-containing protein	7e-50	198
NC_019903:2578966:2581071	2581071	2582462	1392	Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,	PAS domain-containing protein	2e-49	197
NC_009832:2596344:2612844	2612844	2614802	1959	Serratia proteamaculans 568, complete genome	PAS modulated sigma54 specific transcriptional regulator, Fis family	2e-49	197
NC_010622:249625:251706	251706	253064	1359	Burkholderia phymatum STM815 chromosome 1, complete sequence	two component, sigma54 specific, transcriptional regulator, Fis family	2e-49	197
NC_015947:3539472:3541146	3541146	3542519	1374	Burkholderia sp. JV3 chromosome, complete genome	two component sigma-54 specific Fis family transcriptional regulator	1e-49	197
NC_013508:2130681:2139571	2139571	2141493	1923	Edwardsiella tarda EIB202, complete genome	hypothetical protein	1e-49	197
NC_014972:409884:427821	427821	429704	1884	Desulfobulbus propionicus DSM 2032 chromosome, complete genome	Fis family sigma-54 specific transcriptional regulator	1e-49	197
NC_016584:3617439:3626827	3626827	3628923	2097	Desulfosporosinus orientis DSM 765 chromosome, complete genome	transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains	1e-49	197
NC_010725:3917369:3940537	3940537	3941907	1371	Methylobacterium populi BJ001, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	1e-49	197
NC_008577:2115440:2136712	2136712	2138136	1425	Shewanella sp. ANA-3 chromosome 1, complete sequence	sigma54 specific transcriptional regulator, Fis family	4e-49	196
NC_021171:2697398:2708227	2708227	2710245	2019	Bacillus sp. 1NLA3E, complete genome	transcriptional activator of acetoin/glycerol metabolism	4e-49	196
NC_014844:1270618:1294372	1294372	1295769	1398	Desulfovibrio aespoeensis Aspo-2 chromosome, complete genome	sigma-54 factor interaction domain-containing protein	4e-49	196
NC_018870:1953748:1969744	1969744	1971762	2019	Thermacetogenium phaeum DSM 12270 chromosome, complete genome	sigma54 specific transcriptional regulator	4e-49	196
NC_017506:2089769:2111972	2111972	2113150	1179	Marinobacter adhaerens HP15 chromosome, complete genome	two component Fis family sigma54-specific transcriptional regulator	3e-49	196
NC_015740:3486226:3486226	3486226	3487725	1500	Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete	transcriptional regulator	3e-49	196
NC_008260:497855:511420	511420	512814	1395	Alcanivorax borkumensis SK2, complete genome	sigma-54 dependent DNA-binding response regulator	3e-49	196
NC_011662:386162:436224	436224	437579	1356	Thauera sp. MZ1T, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	3e-49	196
NC_015164:2935363:2958485	2958485	2959807	1323	Bacteroides salanitronis DSM 18170 chromosome, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	2e-49	196
NC_004663:1:13288	13288	14586	1299	Bacteroides thetaiotaomicron VPI-5482, complete genome	rteB, two-component system response regulator	2e-49	196
NC_016616:134449:136563	136563	137936	1374	Dechlorosoma suillum PS chromosome, complete genome	response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains	8e-49	195
NC_009922:42696:57367	57367	59235	1869	Alkaliphilus oremlandii OhILAs, complete genome	putative sigma54 specific transcriptional regulator	8e-49	195
NC_007948:517893:532375	532375	533799	1425	Polaromonas sp. JS666, complete genome	sigma54 specific transcriptional regulator with PAS sensor, Fis family	8e-49	195
UCMB5137:409500:432301	432301	434112	1812	Bacillus atrophaeus UCMB-5137	transcriptional regulator	8e-49	195
NC_011883:2826000:2826042	2826042	2827502	1461	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,	sigma54 specific transcriptional regulator, Fis family	7e-49	195
NC_007298:2769525:2799848	2799848	2801194	1347	Dechloromonas aromatica RCB, complete genome	Helix-turn-helix, Fis-type	6e-49	195
NC_014103:2635695:2638388	2638388	2639647	1260	Bacillus megaterium DSM319 chromosome, complete genome	sigma-54 dependent transcriptional regulator	6e-49	195
NC_013315:3613288:3624616	3624616	3626406	1791	Clostridium difficile CD196 chromosome, complete genome	sigma-54-dependent transcriptional activator	5e-49	195
NC_009089:3782000:3796132	3796132	3797892	1761	Clostridium difficile 630, complete genome	sigma-54-dependent transcriptional activator	5e-49	195
NC_017179:3621306:3632634	3632634	3634394	1761	Clostridium difficile BI1, complete genome	sigma-54-dependent transcriptional activator	5e-49	195
NC_016815:844350:846173	846173	847516	1344	Sinorhizobium fredii HH103 plasmid pSfHH103e complete sequence	two component, sigma54 specific, transcriptional regulator, Fis family	1e-48	194
NC_011830:633195:645306	645306	647369	2064	Desulfitobacterium hafniense DCB-2, complete genome	sigma54 specific transcriptional regulator, Fis family	1e-48	194
NC_011883:269497:271014	271014	272831	1818	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,	PAS modulated sigma54 specific transcriptional regulator, Fis family	2e-48	194
NC_014623:9492000:9505949	9505949	9508816	2868	Stigmatella aurantiaca DW4/3-1 chromosome, complete genome	sigma-54 dependent transcriptional regulator	2e-48	194
NC_020126:1873794:1898762	1898762	1903384	4623	Myxococcus stipitatus DSM 14675, complete genome	Fis family transcriptional regulator	2e-48	194
NC_009937:673820:674775	674775	676241	1467	Azorhizobium caulinodans ORS 571, complete genome	HoxA protein	1e-48	194
NC_009922:868262:885969	885969	887327	1359	Alkaliphilus oremlandii OhILAs, complete genome	putative sigma54 specific transcriptional regulator	1e-48	194
NC_020181:929000:961223	961223	962209	987	Enterobacter aerogenes EA1509E, complete genome	Psp operon transcriptional activator	1e-48	194
NC_014551:809025:832271	832271	834079	1809	Bacillus amyloliquefaciens DSM 7, complete genome	transcriptional activator of the ''acoA-acoB-acoC-acoL'' operon	1e-48	194
NC_017188:753039:776281	776281	778089	1809	Bacillus amyloliquefaciens TA208 chromosome, complete genome	transcriptional activator of the acoA-acoB-acoC-acoL operon	1e-48	194
NC_017190:794820:818062	818062	819870	1809	Bacillus amyloliquefaciens LL3 chromosome, complete genome	transcriptional activator of the acoA-acoB-acoC-acoL operon	1e-48	194
NC_017191:754453:777695	777695	779503	1809	Bacillus amyloliquefaciens XH7 chromosome, complete genome	transcriptional regulator	1e-48	194
NC_006347:143876:143876	143876	145198	1323	Bacteroides fragilis YCH46, complete genome	rteB gene product	9e-49	194
NC_014972:1982315:1997310	1997310	1998683	1374	Desulfobulbus propionicus DSM 2032 chromosome, complete genome	Fis family two component sigma54 specific transcriptional regulator	3e-48	193
NC_011060:1898224:1907630	1907630	1909024	1395	Pelodictyon phaeoclathratiforme BU-1, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	3e-48	193
NC_019940:2432689:2434339	2434339	2435685	1347	Thioflavicoccus mobilis 8321 chromosome, complete genome	response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains	2e-48	193
NC_009439:3104000:3106892	3106892	3108367	1476	Pseudomonas mendocina ymp, complete genome	sigma-54 dependent trancsriptional regulator	2e-48	193
NC_013315:895500:908637	908637	910013	1377	Clostridium difficile CD196 chromosome, complete genome	sigma-54-dependent transcriptional regulator	5e-48	192
NC_013316:891782:906252	906252	907628	1377	Clostridium difficile R20291, complete genome	putative sigma-54-dependent transcriptional regulator	5e-48	192
NC_009089:965959:979026	979026	980402	1377	Clostridium difficile 630, complete genome	putative sigma-54-dependent transcriptional regulator	6e-48	192
NC_009699:2142177:2147406	2147406	2149448	2043	Clostridium botulinum F str. Langeland chromosome, complete genome	sigma-54 dependent transcriptional regulator	6e-48	192
NC_014972:1923035:1934307	1934307	1935725	1419	Desulfobulbus propionicus DSM 2032 chromosome, complete genome	putative Fis family two component sigma54 specific transcriptional regulator	6e-48	192
NC_014098:1114076:1133359	1133359	1135254	1896	Bacillus tusciae DSM 2912 chromosome, complete genome	GAF modulated sigma54 specific transcriptional regulator, Fis family	6e-48	192
NC_017297:2143000:2147505	2147505	2149592	2088	Clostridium botulinum F str. 230613 chromosome, complete genome	sigma-54 dependent transcriptional regulator	6e-48	192
NC_008740:979830:992469	992469	993863	1395	Marinobacter aquaeolei VT8, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	7e-48	192
NC_015422:3513689:3560112	3560112	3562094	1983	Alicycliphilus denitrificans K601 chromosome, complete genome	GAF modulated sigma54 specific transcriptional regulator	7e-48	192
NC_017179:905347:918414	918414	919790	1377	Clostridium difficile BI1, complete genome	sigma-54-dependent transcriptional regulator	5e-48	192
NC_020063:2480983:2486976	2486976	2487950	975	Enterobacteriaceae bacterium strain FGI 57, complete genome	psp operon transcriptional activator PspF	5e-48	192
NC_009698:2012500:2017920	2017920	2020010	2091	Clostridium botulinum A str. Hall chromosome, complete genome	sigma-54 dependent transcriptional regulator	4e-48	192
NC_009697:2012500:2017703	2017703	2019793	2091	Clostridium botulinum A str. ATCC 19397 chromosome, complete	sigma-54 dependent transcriptional regulator	4e-48	192
NC_009495:2085000:2089062	2089062	2091152	2091	Clostridium botulinum A str. ATCC 3502 chromosome, complete genome	sigma-54 dependent transcriptional regulator	4e-48	192
NC_015850:736680:741078	741078	742484	1407	Acidithiobacillus caldus SM-1 chromosome, complete genome	sigma-54 dependent DNA-binding response regulator	4e-48	192
NC_021171:4588792:4588792	4588792	4590267	1476	Bacillus sp. 1NLA3E, complete genome	sigma-54 dependent transcription regulator	4e-48	192
NC_008800:2298000:2315717	2315717	2317294	1578	Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,	DNA-binding transcriptional regulator TyrR	4e-48	192
NC_012658:2138791:2143637	2143637	2145694	2058	Clostridium botulinum Ba4 str. 657 chromosome, complete genome	sigma-54 dependent transcriptional regulator	5e-48	192
NC_011071:3544450:3546289	3546289	3547662	1374	Stenotrophomonas maltophilia R551-3, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	5e-48	192
NC_014098:1114076:1123982	1123982	1125955	1974	Bacillus tusciae DSM 2912 chromosome, complete genome	GAF modulated sigma54 specific transcriptional regulator, Fis family	5e-48	192
NC_016776:2516149:2534851	2534851	2536248	1398	Bacteroides fragilis 638R, complete genome	putative two-component response regulator transcriptional regulatory protein	2e-47	191
NC_006347:2375480:2394183	2394183	2395553	1371	Bacteroides fragilis YCH46, complete genome	two-component system response regulator	1e-47	191
NC_016584:432610:433405	433405	435015	1611	Desulfosporosinus orientis DSM 765 chromosome, complete genome	sigma-54 interacting regulator	1e-47	191
NC_015566:4547702:4547702	4547702	4549306	1605	Serratia sp. AS12 chromosome, complete genome	proprionate catabolism activator, Fis family	1e-47	191
NC_018515:4196409:4223154	4223154	4224566	1413	Desulfosporosinus meridiei DSM 13257 chromosome, complete genome	PAS domain-containing protein	1e-47	191
NC_015422:704500:751774	751774	753135	1362	Alicycliphilus denitrificans K601 chromosome, complete genome	Fis family two component sigma54 specific transcriptional regulator	1e-47	191
NC_003228:2437288:2450151	2450151	2451548	1398	Bacteroides fragilis NCTC 9343, complete genome	putative two-component response regulator transcriptional regulatory protein	1e-47	191
NC_010516:2093901:2097167	2097167	2099257	2091	Clostridium botulinum B1 str. Okra, complete genome	sigma-54 dependent transcriptional regulator	9e-48	191
NC_009922:2590317:2590317	2590317	2592059	1743	Alkaliphilus oremlandii OhILAs, complete genome	PAS modulated sigma54 specific transcriptional regulator, Fis family	8e-48	191
NC_021184:2936244:2960665	2960665	2962647	1983	Desulfotomaculum gibsoniae DSM 7213, complete genome	transcriptional activator of acetoin/glycerol metabolism	3e-47	190
NC_008391:639996:660566	660566	661603	1038	Burkholderia cepacia AMMD chromosome 2, complete sequence	sigma54 specific transcriptional regulator, Fis family	2e-47	190
NC_012563:2230403:2235771	2235771	2237861	2091	Clostridium botulinum A2 str. Kyoto, complete genome	sigma-54 dependent transcriptional regulator	2e-47	190
NC_014618:1452927:1456822	1456822	1458441	1620	Enterobacter cloacae SCF1 chromosome, complete genome	Fis family proprionate catabolism activator	2e-47	190
NC_020911:2921925:2956332	2956332	2957387	1056	Octadecabacter antarcticus 307, complete genome	transcriptional regulatory protein	6e-47	189
NC_014098:1553900:1571416	1571416	1573455	2040	Bacillus tusciae DSM 2912 chromosome, complete genome	GAF modulated sigma54 specific transcriptional regulator, Fis family	6e-47	189
NC_014220:1732254:1740787	1740787	1742853	2067	Syntrophothermus lipocalidus DSM 12680 chromosome, complete genome	sigma54 specific transcriptional regulator, Fis family	5e-47	189
NC_009446:473960:473960	473960	475546	1587	Dichelobacter nodosus VCS1703A, complete genome	two-component response regulator PilR	5e-47	189
NC_010678:114000:114117	114117	116063	1947	Ralstonia pickettii 12J chromosome 2, complete sequence	proprionate catabolism activator, Fis family	4e-47	189
NC_012857:557911:557911	557911	559857	1947	Ralstonia pickettii 12D chromosome 2, complete genome	proprionate catabolism activator, Fis family	4e-47	189
NC_015573:3070582:3092356	3092356	3093819	1464	Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genome	sigma54 specific transcriptional regulator with PAS/PAC sensor, Fis family	4e-47	189
NC_008826:539835:561993	561993	563987	1995	Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence	sigma-54 dependent transcriptional activator	1e-46	188
NC_018515:1663912:1669953	1669953	1671356	1404	Desulfosporosinus meridiei DSM 13257 chromosome, complete genome	PAS domain-containing protein	8e-47	188
NC_020126:204216:215278	215278	216618	1341	Myxococcus stipitatus DSM 14675, complete genome	sigma-54 dependent DNA-binding response regulator	8e-47	188
NC_010688:1192410:1253612	1253612	1255006	1395	Xanthomonas campestris pv. campestris, complete genome	two-component system response regulator	8e-47	188
NC_015510:6226482:6241472	6241472	6243070	1599	Haliscomenobacter hydrossis DSM 1100 chromosome, complete genome	putative two component sigma-54 specific transcriptional regulator	8e-47	188
NC_007645:4356865:4370207	4370207	4371610	1404	Hahella chejuensis KCTC 2396, complete genome	sigma 54-dependent transcriptional activator	8e-47	188
NC_017271:3641705:3646638	3646638	3648041	1404	Xanthomonas campestris pv. raphani 756C chromosome, complete	two-component system response regulator protein	8e-47	188
NC_015276:1426000:1433036	1433036	1434445	1410	Marinomonas mediterranea MMB-1 chromosome, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	7e-47	188
NC_003902:3666544:3669757	3669757	3671160	1404	Xanthomonas campestris pv. campestris str. ATCC 33913, complete	two-component system regulatory protein	7e-47	188
NC_007086:1224867:1277218	1277218	1278621	1404	Xanthomonas campestris pv. campestris str. 8004, complete genome	two-component system regulatory protein	7e-47	188
NC_008340:277223:290398	290398	291753	1356	Alkalilimnicola ehrlichei MLHE-1, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	2e-46	187
NC_006511:1243817:1263206	1263206	1264186	981	Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC	psp operon transcriptional activator PspF	2e-46	187
NC_011147:1239904:1257049	1257049	1258029	981	Salmonella enterica subsp. enterica serovar Paratyphi A str	phage shock protein operon transcriptional activator	2e-46	187
NC_013960:841181:855025	855025	856362	1338	Nitrosococcus halophilus Nc4 chromosome, complete genome	sigma-54 factor interaction domain-containing protein	2e-46	187
NC_007347:3204637:3227851	3227851	3229440	1590	Ralstonia eutropha JMP134 chromosome 1, complete sequence	Helix-turn-helix, Fis-type	2e-46	187
NC_015589:3556197:3556197	3556197	3558212	2016	Desulfotomaculum ruminis DSM 2154 chromosome, complete genome	PAS sensor protein	2e-46	187
NC_020911:2921925:2954362	2954362	2955552	1191	Octadecabacter antarcticus 307, complete genome	putative transcriptional regulatory protein	2e-46	187
NC_012039:480625:500286	500286	501575	1290	Campylobacter lari RM2100, complete genome	sigma-54 dependent DNA-binding response regulator	1e-46	187
NC_007508:3835000:3836948	3836948	3838402	1455	Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome	two-component system response regulator PilR	1e-46	187
NC_010718:1229355:1233359	1233359	1234792	1434	Natranaerobius thermophilus JW/NM-WN-LF, complete genome	PAS modulated sigma54 specific transcriptional regulator, Fis family	3e-46	186
NC_010794:1476494:1482569	1482569	1484548	1980	Methylacidiphilum infernorum V4, complete genome	Transcriptional activator of acetoin/glycerol metabolism	4e-46	186
NC_015425:405058:405058	405058	406557	1500	Clostridium botulinum BKT015925 chromosome, complete genome	sigma-54 dependent regulatory protein	4e-46	186
NC_009092:1504363:1573108	1573108	1574451	1344	Shewanella loihica PV-4, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	5e-46	186
NC_009092:1874888:1886174	1886174	1887544	1371	Shewanella loihica PV-4, complete genome	sigma54 specific transcriptional regulator, Fis family	5e-46	186
NC_015510:4982255:4984811	4984811	4986181	1371	Haliscomenobacter hydrossis DSM 1100 chromosome, complete genome	Fis family two component sigma-54 specific transcriptional regulator	3e-46	186
NC_003296:140889:141978	141978	143927	1950	Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete	PUTATIVE PROPIONATE CATABOLISM OPERON REGULATORY TRANSCRIPTION REGULATOR PROTEIN	3e-46	186
NC_013173:3854368:3878029	3878029	3879372	1344	Desulfomicrobium baculatum DSM 4028, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	3e-46	186
NC_010506:3585533:3592665	3592665	3594617	1953	Shewanella woodyi ATCC 51908, complete genome	GAF modulated sigma54 specific transcriptional regulator, Fis family	3e-46	186
NC_014310:94645:95736	95736	97673	1938	Ralstonia solanacearum PSI07 megaplasmid, complete sequence	propionate catabolism operon regulatory transcription regulator (prpr)	3e-46	186
NC_016610:1310275:1335271	1335271	1336593	1323	Tannerella forsythia ATCC 43037 chromosome, complete genome	Sigma-54 interaction domain-containing protein	3e-46	186
NC_007907:321537:321537	321537	323510	1974	Desulfitobacterium hafniense Y51, complete genome	hypothetical protein	2e-46	186
NC_011772:323050:333306	333306	334673	1368	Bacillus cereus G9842, complete genome	sensory box sigma-54 dependent DNA-binding response regulator	7e-46	185
NC_003919:3812778:3814656	3814656	3816110	1455	Xanthomonas axonopodis pv. citri str. 306, complete genome	two-component system regulatory protein	7e-46	185
NC_011725:334000:347096	347096	348463	1368	Bacillus cereus B4264 chromosome, complete genome	sensory box sigma-54 dependent DNA-binding response regulator	6e-46	185
NC_014171:343834:355790	355790	357157	1368	Bacillus thuringiensis BMB171 chromosome, complete genome	sigma-54-dependent transcriptional activator	6e-46	185
NC_020063:2480983:2480983	2480983	2482524	1542	Enterobacteriaceae bacterium strain FGI 57, complete genome	PAS domain S-box	6e-46	185
NC_015138:322386:322386	322386	323774	1389	Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete	two component sigma54 specific transcriptional regulator	5e-46	185
NC_021184:3961552:3965177	3965177	3966643	1467	Desulfotomaculum gibsoniae DSM 7213, complete genome	transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains	1e-45	184
NC_013421:1744928:1752564	1752564	1754162	1599	Pectobacterium wasabiae WPP163, complete genome	Sigma 54 interacting domain protein	1e-45	184
NC_015589:814530:834162	834162	835646	1485	Desulfotomaculum ruminis DSM 2154 chromosome, complete genome	sigma-54 factor interaction domain-containing protein	2e-45	183
NC_016860:1752000:1773871	1773871	1775412	1542	Salmonella enterica subsp. enterica serovar Typhimurium str	DNA-binding transcriptional regulator TyrR	2e-45	183
NC_013959:2666321:2676735	2676735	2678096	1362	Sideroxydans lithotrophicus ES-1 chromosome, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	7e-45	182
NC_011740:2737467:2737467	2737467	2739053	1587	Escherichia fergusonii ATCC 35469, complete genome	DNA-binding transcriptional activator	5e-45	182
NC_007493:207932:209722	209722	211041	1320	Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence	Sigma-54 dependent transcriptional regulator	5e-45	182
NC_007498:1848437:1848437	1848437	1849831	1395	Pelobacter carbinolicus DSM 2380, complete genome	transcriptional regulator	4e-45	182
NC_016633:2239413:2247607	2247607	2248605	999	Sphaerochaeta pleomorpha str. Grapes chromosome, complete genome	response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains	1e-44	181
NC_015410:2351464:2352873	2352873	2354702	1830	Pseudomonas mendocina NK-01 chromosome, complete genome	fis family GAF modulated sigma54 specific transcriptional regulator	1e-44	181
NC_013440:1408689:1427949	1427949	1429430	1482	Haliangium ochraceum DSM 14365, complete genome	sigma54 specific transcriptional regulator, Fis family	1e-44	181
NC_016584:4325964:4343378	4343378	4345468	2091	Desulfosporosinus orientis DSM 765 chromosome, complete genome	PAS domain-containing protein	1e-44	181
NC_010682:288415:304111	304111	306174	2064	Ralstonia pickettii 12J chromosome 1, complete sequence	GAF modulated sigma54 specific transcriptional regulator, Fis family	9e-45	181
NC_014311:1309562:1328866	1328866	1330194	1329	Ralstonia solanacearum PSI07 chromosome, complete genome	transcriptional response regulator, C4-dicarboxylate transport response regulator	9e-45	181
NC_021066:1778000:1795344	1795344	1796885	1542	Raoultella ornithinolytica B6, complete genome	DNA-binding transcriptional regulator TyrR	2e-44	180
NC_014355:1865003:1929117	1929117	1930463	1347	Candidatus Nitrospira defluvii, complete genome	sigma-54 dependent transcriptional regulator	2e-44	180
NC_011769:820521:846293	846293	847762	1470	Desulfovibrio vulgaris str. 'Miyazaki F', complete genome	putative two component, sigma54 specific, transcriptional regulator, Fis family	6e-44	179
NC_009792:1345500:1350027	1350027	1351568	1542	Citrobacter koseri ATCC BAA-895, complete genome	hypothetical protein	6e-44	179
NC_015064:2871152:2878592	2878592	2879998	1407	Acidobacterium sp. MP5ACTX9 chromosome, complete genome	Sigma 54 interacting domain protein	5e-44	179
NC_011901:342777:353596	353596	354969	1374	Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete	response regulator receiver protein	7e-44	178
NC_016584:1714507:1716557	1716557	1717972	1416	Desulfosporosinus orientis DSM 765 chromosome, complete genome	PAS domain-containing protein	8e-44	178
NC_008577:613958:616916	616916	618280	1365	Shewanella sp. ANA-3 chromosome 1, complete sequence	sigma54 specific transcriptional regulator, Fis family	1e-43	178
NC_008781:654289:656373	656373	658334	1962	Polaromonas naphthalenivorans CJ2, complete genome	GAF modulated sigma54 specific transcriptional regulator, Fis family	2e-43	177
NC_012691:2097287:2110580	2110580	2112136	1557	Tolumonas auensis DSM 9187, complete genome	transcriptional regulator, TyrR	2e-43	177
NC_009720:4367584:4369025	4369025	4370347	1323	Xanthobacter autotrophicus Py2, complete genome	two component, sigma54 specific, Fis family transcriptional regulator	2e-43	177
NC_016830:2247789:2282479	2282479	2284323	1845	Pseudomonas fluorescens F113 chromosome, complete genome	sigma-54 dependent transcriptional regulator	2e-43	177
NC_015164:1182469:1204025	1204025	1205350	1326	Bacteroides salanitronis DSM 18170 chromosome, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	3e-43	176
NC_015663:4447984:4468705	4468705	4470246	1542	Enterobacter aerogenes KCTC 2190 chromosome, complete genome	DNA-binding transcriptional regulator TyrR	5e-43	176
NC_012721:2694829:2697208	2697208	2699247	2040	Burkholderia glumae BGR1 chromosome 2, complete genome	hypothetical protein	2e-42	174
NC_012108:2194251:2207513	2207513	2209012	1500	Desulfobacterium autotrophicum HRM2, complete genome	sigma-54 dependent DNA-binding response regulator (Fis-family protein)	2e-42	174
NC_014532:349384:350307	350307	351911	1605	Halomonas elongata DSM 2581, complete genome	putative PAS/PAC sensor protein	1e-42	174
NC_009614:2034265:2043472	2043472	2044785	1314	Bacteroides vulgatus ATCC 8482 chromosome, complete genome	two-component system response regulator	1e-42	174
NC_009614:947775:954854	954854	956167	1314	Bacteroides vulgatus ATCC 8482 chromosome, complete genome	two-component system response regulator	1e-42	174
NC_014541:2325780:2343831	2343831	2345162	1332	Ferrimonas balearica DSM 9799 chromosome, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	1e-42	174
NC_013410:1651000:1699686	1699686	1700639	954	Fibrobacter succinogenes subsp. succinogenes S85 chromosome,	Fis family sigma-54 specific transcriptional regulator	2e-42	173
NC_009483:2489000:2530462	2530462	2531904	1443	Geobacter uraniireducens Rf4 chromosome, complete genome	two component sigma-54 specific Fis family transcriptional regulator	7e-42	172
NC_012560:4201969:4201969	4201969	4203810	1842	Azotobacter vinelandii DJ, complete genome	Sigma54-dependent transcriptional activator protein, AcoR	6e-42	172
NC_021150:4201965:4201965	4201965	4203806	1842	Azotobacter vinelandii CA6, complete genome	Sigma54-dependent transcriptional activator protein, AcoR	6e-42	172
NC_021150:3505234:3509796	3509796	3511301	1506	Azotobacter vinelandii CA6, complete genome	sigma54-dependent activator protein, FleQ	4e-42	172
NC_012560:3505235:3509797	3509797	3511302	1506	Azotobacter vinelandii DJ, complete genome	sigma54-dependent activator protein, FleQ	4e-42	172
NC_015510:6653159:6684528	6684528	6686081	1554	Haliscomenobacter hydrossis DSM 1100 chromosome, complete genome	putative two component sigma-54 specific transcriptional regulator	1e-41	171
NC_002937:1233000:1247371	1247371	1248810	1440	Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete	sigma-54 dependent transcriptional regulator, putative/response regulator	2e-41	170
NC_008011:1394777:1411391	1411391	1412671	1281	Lawsonia intracellularis PHE/MN1-00, complete genome	transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains	6e-41	169
NC_014355:3248386:3246938	3246938	3248389	1452	Candidatus Nitrospira defluvii, complete genome	sigma-54 dependent transcriptional regulator	6e-41	169
NC_004578:5916711:5939068	5939068	5940018	951	Pseudomonas syringae pv. tomato str. DC3000, complete genome	sigma-54-binding protein	4e-41	169
NC_009053:895965:918871	918871	920019	1149	Actinobacillus pleuropneumoniae L20, complete genome	transcriptional regulatory protein TyrR	8e-41	168
NC_010278:860165:882355	882355	883503	1149	Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,	transcriptional regulatory protein	1e-40	168
NC_012791:4680500:4695694	4695694	4697133	1440	Variovorax paradoxus S110 chromosome 1, complete genome	sigma54 specific transcriptional regulator, Fis family	2e-40	167
NC_014838:218000:221722	221722	223572	1851	Pantoea sp. At-9b plasmid pPAT9B01, complete sequence	GAF modulated sigma54 specific transcriptional regulator, Fis family	2e-40	167
NC_015942:722980:729948	729948	732134	2187	Acidithiobacillus ferrivorans SS3 chromosome, complete genome	Fis family sigma-54 specific transcriptional regulator	3e-40	166
NC_012792:962292:984827	984827	986953	2127	Variovorax paradoxus S110 chromosome 2, complete genome	GAF modulated sigma54 specific transcriptional regulator, Fis family	8e-40	165
NC_014931:5594946:5610412	5610412	5611842	1431	Variovorax paradoxus EPS chromosome, complete genome	sigma54 specific transcriptional regulator, Fis family	9e-40	165
NC_012108:2305327:2340588	2340588	2342816	2229	Desulfobacterium autotrophicum HRM2, complete genome	sigma-54 dependent two component DNA-binding response regulator (Fis family protein)	2e-39	164
NC_019907:318077:337141	337141	338502	1362	Liberibacter crescens BT-1 chromosome, complete genome	two component response regulator nitrogen assimilation regulatory protein	7e-39	162
NC_012214:1650523:1650523	1650523	1652454	1932	Erwinia pyrifoliae Ep1/96, complete genome	transcriptional regulator	9e-39	161
NC_009439:20545:31594	31594	32523	930	Pseudomonas mendocina ymp, complete genome	sigma-54 dependent trancsriptional regulator	9e-39	161
NC_011761:1499500:1506248	1506248	1508077	1830	Acidithiobacillus ferrooxidans ATCC 23270 chromosome, complete	sigma-54 dependent transcriptional regulator	2e-38	160
NC_017986:3283433:3305354	3305354	3307414	2061	Pseudomonas putida ND6 chromosome, complete genome	GAF modulated sigma54 specific transcriptional regulator, Fis family	2e-38	160
NC_020064:4125500:4140455	4140455	4141432	978	Serratia marcescens FGI94, complete genome	sigma-54 interacting regulator	2e-38	160
NC_015064:2900907:2901479	2901479	2902942	1464	Acidobacterium sp. MP5ACTX9 chromosome, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	1e-38	160
NC_010571:5650806:5669691	5669691	5671205	1515	Opitutus terrae PB90-1, complete genome	putative two component, sigma54 specific, transcriptional regulator, Fis family	1e-38	160
NC_013440:8443451:8457182	8457182	8458810	1629	Haliangium ochraceum DSM 14365, complete genome	Sigma 54 interacting domain protein	3e-38	159
NC_017161:927290:942555	942555	943877	1323	Hydrogenobacter thermophilus TK-6 chromosome, complete genome	two component Fis family sigma54-specific transcriptional regulator	3e-38	159
NC_013799:927300:942565	942565	943866	1302	Hydrogenobacter thermophilus TK-6, complete genome	response regulator	4e-38	159
NC_008782:1917634:1920037	1920037	1922040	2004	Acidovorax sp. JS42, complete genome	GAF modulated sigma54 specific transcriptional regulator, Fis family	5e-38	159
NC_003911:4001094:4001094	4001094	4002827	1734	Silicibacter pomeroyi DSS-3, complete genome	acetoin catabolism regulatory protein	1e-37	158
NC_013416:875758:875758	875758	876717	960	Aggregatibacter actinomycetemcomitans D11S-1, complete genome	GTP-binding proten HflX	2e-37	157
NC_016513:1185241:1185241	1185241	1186200	960	Aggregatibacter actinomycetemcomitans ANH9381 chromosome, complete	GTP-binding proten HflX	2e-37	157
NC_014323:4355266:4359701	4359701	4361014	1314	Herbaspirillum seropedicae SmR1 chromosome, complete genome	sigma54-dependent transcription regulator protein	2e-37	157
NC_008027:5576458:5580245	5580245	5581192	948	Pseudomonas entomophila L48, complete genome	sigma-54 dependent transcriptional regulator	3e-37	156
NC_017270:1755552:1793339	1793339	1795099	1761	Vibrio cholerae LMA3984-4 chromosome chromosome I, complete	Sigma-54 dependent transcriptional regulator	4e-37	156
NC_007492:3384077:3415294	3415294	3417174	1881	Pseudomonas fluorescens PfO-1, complete genome	Possible Transcriptional Regulator, Fis family	7e-37	155
NC_009439:20545:30305	30305	31210	906	Pseudomonas mendocina ymp, complete genome	sigma-54 dependent trancsriptional regulator	2e-36	154
NC_012668:1688500:1688543	1688543	1690306	1764	Vibrio cholerae MJ-1236 chromosome 1, complete sequence	sigma-54 dependent transcriptional regulator	1e-36	154
NC_012660:819381:829441	829441	830358	918	Pseudomonas fluorescens SBW25 chromosome, complete genome	putative type III secretion system, regulatory protein	3e-36	153
NC_018868:3229381:3253280	3253280	3254578	1299	Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome	sigma 54 interacting domain-containing protein	3e-36	153
NC_015633:2565753:2605779	2605779	2607113	1335	Vibrio anguillarum 775 chromosome chromosome I, complete sequence	Sigma54-dependent transcriptional activator	5e-36	152
NC_016845:4077293:4099713	4099713	4101500	1788	Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,	putative Fis-type transcriptional regulator	7e-36	152
NC_014541:1996811:2016736	2016736	2018118	1383	Ferrimonas balearica DSM 9799 chromosome, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	1e-35	151
NC_020126:2262049:2282559	2282559	2283911	1353	Myxococcus stipitatus DSM 14675, complete genome	Fis family transcriptional regulator	9e-36	151
NC_010625:1551430:1550118	1550118	1551500	1383	Burkholderia phymatum STM815 plasmid pBPHY01, complete sequence	response regulator receiver protein	2e-35	150
NC_010162:5129270:5141710	5141710	5142939	1230	Sorangium cellulosum 'So ce 56', complete genome	sigma-54 dependent transcriptional regulator	1e-34	148
NC_016745:1892500:1908042	1908042	1909736	1695	Oceanimonas sp. GK1 chromosome, complete genome	acetoin catabolism regulatory protein	1e-34	147
NC_012796:3374911:3415541	3415541	3417343	1803	Desulfovibrio magneticus RS-1, complete genome	hypothetical protein	1e-32	141
NC_007498:197810:220079	220079	222901	2823	Pelobacter carbinolicus DSM 2380, complete genome	transcriptional regulator	6e-32	139
NC_013894:672840:691778	691778	693316	1539	Thermocrinis albus DSM 14484 chromosome, complete genome	sigma54 specific transcriptional regulator, Fis family	4e-32	139
NC_017075:1233377:1233377	1233377	1235209	1833	Rubrivivax gelatinosus IL144, complete genome	sigma54-dependent DNA-binding transcriptional regulator	4e-32	139
NC_015224:647341:661506	661506	663425	1920	Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,	DNA-binding transcriptional regulator DhaR	1e-31	137
NC_008800:614850:629026	629026	630945	1920	Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,	DNA-binding transcriptional regulator DhaR	1e-31	137
NC_015381:1173603:1173603	1173603	1175003	1401	Burkholderia gladioli BSR3 chromosome 1, complete sequence	Sigma-54 dependent DNA-binding response regulator	5e-31	135
NC_007645:1698803:1723778	1723778	1725412	1635	Hahella chejuensis KCTC 2396, complete genome	sigma54-dependent transcription regulator RtcR	9e-30	132
NC_012796:1049034:1108250	1108250	1110064	1815	Desulfovibrio magneticus RS-1, complete genome	hypothetical protein	3e-29	130
NC_002939:2697767:2712307	2712307	2715018	2712	Geobacter sulfurreducens PCA, complete genome	sigma-54 dependent transcriptional regulator	2e-29	130
NC_014973:493500:515203	515203	517989	2787	Geobacter sp. M18 chromosome, complete genome	Sigma 54 interacting domain-containing protein	9e-29	128
NC_011146:382719:402734	402734	405511	2778	Geobacter bemidjiensis Bem, complete genome	putative phytochrome sensor protein	1e-28	127
NC_014618:690056:694767	694767	696338	1572	Enterobacter cloacae SCF1 chromosome, complete genome	sigma 54 interacting domain-containing protein	2e-28	127
NC_020209:47504:105725	105725	106447	723	Pseudomonas poae RE*1-1-14, complete genome	type III secretion system transcriptional regulator RspS	3e-28	126
NC_011740:3453455:3453455	3453455	3455053	1599	Escherichia fergusonii ATCC 35469, complete genome	sigma 54-dependent transcriptional regulator of rtcBA expression	9e-28	125
NC_007946:3811082:3811082	3811082	3812680	1599	Escherichia coli UTI89, complete genome	transcriptional regulator RtcR	1e-27	124
NC_008253:3666387:3664807	3664807	3666405	1599	Escherichia coli 536, complete genome	transcriptional regulatory protein RtcR	1e-27	124
NC_008563:3843859:3843859	3843859	3845418	1560	Escherichia coli APEC O1, complete genome	transcriptional regulatory protein RtcR	2e-27	124
NC_011751:3984236:3984236	3984236	3985834	1599	Escherichia coli UMN026 chromosome, complete genome	sigma 54-dependent transcriptional regulator of rtcBA expression	2e-27	124
NC_012796:1049034:1074042	1074042	1075856	1815	Desulfovibrio magneticus RS-1, complete genome	hypothetical protein	2e-27	124
NC_011742:3758618:3758618	3758618	3760177	1560	Escherichia coli S88 chromosome, complete genome		2e-27	124
NC_004431:3986472:3984892	3984892	3986490	1599	Escherichia coli CFT073, complete genome	Transcriptional Regulatory protein rtcR	4e-27	122
NC_007492:2203220:2217490	2217490	2219091	1602	Pseudomonas fluorescens PfO-1, complete genome	Regulator of RNA terminal phosphate cyclase	2e-26	120
NC_014623:8798820:8806684	8806684	8808051	1368	Stigmatella aurantiaca DW4/3-1 chromosome, complete genome	RNA polymerase sigma factor 54	4e-25	116
NC_012489:209016:236359	236359	237615	1257	Gemmatimonas aurantiaca T-27, complete genome	Fis family transcriptional regulator	5e-25	116
NC_020418:116500:153513	153513	155099	1587	Morganella morganii subsp. morganii KT, complete genome	Transcriptional regulatory protein RtcR	1e-24	115
NC_012918:356019:356019	356019	357503	1485	Geobacter sp. M21 chromosome, complete genome	sigma-54 interacting domain-containing protein	1e-24	115
NC_008687:133728:133728	133728	135053	1326	Paracoccus denitrificans PD1222 chromosome 2, complete sequence	two component, sigma54 specific, transcriptional regulator, Fis family	1e-24	114
NC_017297:2114222:2121568	2121568	2122170	603	Clostridium botulinum F str. 230613 chromosome, complete genome		3e-24	113
NC_011145:4430501:4456374	4456374	4457519	1146	Anaeromyxobacter sp. K, complete genome	response regulator receiver protein	1e-23	111
NC_010498:4967724:4977307	4977307	4979256	1950	Escherichia coli SMS-3-5, complete genome	putative regulatory protein IbeR	4e-23	109
NC_014655:2581968:2603663	2603663	2604964	1302	Leadbetterella byssophila DSM 17132 chromosome, complete genome	two component, sigma54 specific, transcriptional regulator, fis family	7e-23	108
NC_009725:2072475:2100621	2100621	2101613	993	Bacillus amyloliquefaciens FZB42, complete genome	YplP	8e-23	108
NC_019842:2134803:2158644	2158644	2159636	993	Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,	hypothetical protein	1e-22	108
NC_018012:1789028:1795119	1795119	1795835	717	Thiocystis violascens DSM 198 chromosome, complete genome		2e-22	107
NC_011205:4761598:4781590	4781590	4784355	2766	Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853	sigma-54 interaction domain-containing protein	5e-22	106
NC_014377:1400544:1412036	1412036	1414996	2961	Thermosediminibacter oceani DSM 16646 chromosome, complete genome	PTS system transcriptional activator	4e-22	106
NC_011294:4604283:4624283	4624283	4627048	2766	Salmonella enterica subsp. enterica serovar Enteritidis str	transcriptional regulatory protein	9e-22	105
NC_011274:4577402:4597534	4597534	4600299	2766	Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91	transcriptional regulator	9e-22	105
NC_003197:3971905:3972549	3972549	3975347	2799	Salmonella typhimurium LT2, complete genome	putative transcriptional regulator	2e-21	104
NC_016860:3995445:3995445	3995445	3998243	2799	Salmonella enterica subsp. enterica serovar Typhimurium str	sigma-54 dependent transcriptional regulator	2e-21	104
NC_011080:3941909:3941909	3941909	3944707	2799	Salmonella enterica subsp. enterica serovar Newport str. SL254,	sigma-54 dependent transcription regulator	2e-21	104
NC_006511:3759550:3760690	3760690	3763488	2799	Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC	putative NtrC family transcriptional regulators, ATPase domain	2e-21	104
NC_011083:3985618:3986758	3986758	3989556	2799	Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,	sigma-54 dependent transcription regulator	2e-21	104
NC_011149:3895921:3897061	3897061	3899859	2799	Salmonella enterica subsp. enterica serovar Agona str. SL483,	sigma-54 dependent transcription regulator	2e-21	104
NC_011147:3755725:3756369	3756369	3759167	2799	Salmonella enterica subsp. enterica serovar Paratyphi A str	NtrC family transcriptional regulator	2e-21	104
NC_010102:3919999:3920643	3920643	3923441	2799	Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,	hypothetical protein	3e-21	103
NC_011094:3853036:3853036	3853036	3855834	2799	Salmonella enterica subsp. enterica serovar Schwarzengrund str	sigma-54 dependent transcription regulator	4e-21	103
NC_020410:2068500:2093431	2093431	2094423	993	Bacillus amyloliquefaciens subsp. plantarum UCMB5036 complete	transcriptional enhancer	4e-21	103
NC_016810:3993863:3993863	3993863	3996661	2799	Salmonella enterica subsp. enterica serovar Typhimurium str	putative NtrC family transcriptional regulator	9e-21	102
NC_016856:3985597:3986241	3986241	3989039	2799	Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S	putative transcriptional regulator	9e-21	102
NC_016857:3993864:3993864	3993864	3996662	2799	Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74	sigma-54 dependent transcription regulator	9e-21	102
NC_016863:3933848:3933848	3933848	3936646	2799	Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1	putative transcriptional regulator	9e-21	102
NC_017046:3991551:3992691	3992691	3995489	2799	Salmonella enterica subsp. enterica serovar Typhimurium str. 798	NtrC-family transcriptional regulator	9e-21	102
NC_016023:875416:889948	889948	892254	2307	Bacillus coagulans 36D1 chromosome, complete genome	sigma-54 factor interaction domain-containing protein	6e-21	102
NC_012125:3905782:3905782	3905782	3908580	2799	Salmonella enterica subsp. enterica serovar Paratyphi C strain	NtrC family transcriptional regulators, ATPase domain protein	5e-21	102
NC_013410:2691437:2707799	2707799	2709217	1419	Fibrobacter succinogenes subsp. succinogenes S85 chromosome,	sigma-54 interacting domain-containing protein	1e-20	101
NC_009092:3682413:3697423	3697423	3698811	1389	Shewanella loihica PV-4, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	5e-20	99.8
NC_021182:3771523:3788403	3788403	3791198	2796	Clostridium pasteurianum BC1, complete genome	transcriptional antiterminator	6e-20	99.4
NC_009792:4693152:4712664	4712664	4715462	2799	Citrobacter koseri ATCC BAA-895, complete genome	hypothetical protein	2e-19	97.8
NC_014377:1897857:1912112	1912112	1914745	2634	Thermosediminibacter oceani DSM 16646 chromosome, complete genome	PTS system transcriptional activator	1e-17	91.7
NC_016023:1874827:1887721	1887721	1889502	1782	Bacillus coagulans 36D1 chromosome, complete genome	Fis family proprionate catabolism activator	3e-17	90.1
NC_014034:1418681:1435179	1435179	1436972	1794	Rhodobacter capsulatus SB1003 chromosome, complete genome	GAF modulated sigma54 specific transcriptional regulator, Fis family	4e-17	89.7
NC_006512:551312:566156	566156	567769	1614	Idiomarina loihiensis L2TR, complete genome	Possible regulatory protein containing AAA-type ATPase domain	4e-17	89.7
NC_019978:2532640:2552799	2552799	2555534	2736	Halobacteroides halobius DSM 5150, complete genome	transcriptional antiterminator	9e-17	89
NC_020063:4653422:4663834	4663834	4666434	2601	Enterobacteriaceae bacterium strain FGI 57, complete genome	transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain	9e-17	88.6
NC_017179:2513804:2528473	2528473	2531397	2925	Clostridium difficile BI1, complete genome	sigma-54 interacting transcription antiterminator	2e-16	87.8
NC_013315:2505792:2520461	2520461	2523385	2925	Clostridium difficile CD196 chromosome, complete genome	sigma-54 interacting transcription antiterminator	2e-16	87.8
NC_013316:2585666:2601017	2601017	2603941	2925	Clostridium difficile R20291, complete genome	putative sigma-54 interacting transcription antiterminator	2e-16	87.8
NC_009617:234782:249021	249021	251945	2925	Clostridium beijerinckii NCIMB 8052 chromosome, complete genome	sigma-54 factor interaction domain-containing protein	1e-15	85.1
NC_016612:2902628:2924388	2924388	2927264	2877	Klebsiella oxytoca KCTC 1686 chromosome, complete genome	LevR transcriptional regulator	2e-15	84.3
NC_005945:4898841:4926015	4926015	4928690	2676	Bacillus anthracis str. Sterne, complete genome	transcription antiterminator, BglG family	3e-15	84
NC_003909:4854379:4897771	4897771	4898847	1077	Bacillus cereus ATCC 10987, complete genome	transcription antiterminator, BglG family	4e-15	83.6
NC_009959:55567:1936	1936	3684	1749	Dinoroseobacter shibae DFL 12 plasmid pDSHI05, complete sequence	Fis family GAF modulated sigma54 specific transcriptional regulator	6e-15	82.8
NC_015425:841754:860211	860211	862979	2769	Clostridium botulinum BKT015925 chromosome, complete genome	sigma-54 factor, interaction domain-containing protein	1e-14	82
NC_008321:3189974:3204791	3204791	3206068	1278	Shewanella sp. MR-4, complete genome	two component, sigma54 specific, transcriptional regulator, Fis family	3e-14	80.5
NC_009617:4436837:4453694	4453694	4456489	2796	Clostridium beijerinckii NCIMB 8052 chromosome, complete genome	sigma-54 factor interaction domain-containing protein	1e-13	78.2
NC_020291:5409587:5427215	5427215	5429947	2733	Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome	transcriptional antiterminator	2e-13	77.8
NC_009617:648000:648740	648740	651622	2883	Clostridium beijerinckii NCIMB 8052 chromosome, complete genome	sigma-54 factor interaction domain-containing protein	1e-12	75.1
NC_015975:1936504:1954422	1954422	1957256	2835	Lactobacillus ruminis ATCC 27782 chromosome, complete genome	transcriptional regulator	3e-12	73.9
NC_011149:4474012:4495750	4495750	4498470	2721	Salmonella enterica subsp. enterica serovar Agona str. SL483,	sigma-54 factor, interaction domain-containing protein	7e-12	72.4
NC_006576:2683467:2683467	2683467	2685983	2517	Synechococcus elongatus PCC 6301, complete genome	nitrogen assimilation regulatory protein	3e-11	70.5
NC_007604:1586243:1586243	1586243	1588759	2517	Synechococcus elongatus PCC 7942, complete genome	nitrogen assimilation regulatory protein	3e-11	70.5
NC_015968:4117835:4141012	4141012	4143126	2115	Enterobacter asburiae LF7a chromosome, complete genome	Sigma 54 interacting domain-containing protein	3e-11	70.1
NC_020291:4305521:4319155	4319155	4320915	1761	Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome	transcriptional regulator	3e-10	67
NC_017518:98639:124546	124546	125823	1278	Neisseria meningitidis NZ-05/33 chromosome, complete genome	DNA-binding response regulator, Fis family	4e-10	66.6
NC_010120:2055803:2076517	2076517	2077647	1131	Neisseria meningitidis 053442, complete genome	nitrogen assimilation regulatory protein NtrX	3e-09	63.5
NC_017513:115870:115870	115870	117147	1278	Neisseria meningitidis G2136 chromosome, complete genome	DNA-binding response regulator, Fis family	4e-09	63.5
NC_017515:76861:129595	129595	130872	1278	Neisseria meningitidis M04-240196 chromosome, complete genome	DNA-binding response regulator, Fis family	5e-09	63.2
NC_011035:1974489:2001543	2001543	2002820	1278	Neisseria gonorrhoeae NCCP11945 chromosome, complete genome	Putative two-component system transcriptional response regulator	6e-09	62.8
NC_017511:1883663:1909813	1909813	1911090	1278	Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genome	putative two-component system transcriptional response regulator	6e-09	62.8
NC_017517:98554:125058	125058	126335	1278	Neisseria meningitidis M01-240355 chromosome, complete genome	DNA-binding response regulator, Fis family	6e-09	62.8
NC_017501:121902:121902	121902	123179	1278	Neisseria meningitidis 8013, complete genome	putative two-component system transcriptional regulator protein	5e-09	62.8
NC_013016:2041890:2062604	2062604	2063881	1278	Neisseria meningitidis alpha14 chromosome, complete genome	nitrogen assimilation regulatory protein NtrX	5e-09	62.8
NC_017512:2116295:2137007	2137007	2138284	1278	Neisseria meningitidis WUE 2594, complete genome	putative two-component system transcriptional regulator protein	9e-09	62.4
NC_017516:96879:123618	123618	124895	1278	Neisseria meningitidis H44/76 chromosome, complete genome	DNA-binding response regulator, Fis family	1e-08	62
NC_017516:123618:123618	123618	124895	1278	Neisseria meningitidis H44/76 chromosome, complete genome	DNA-binding response regulator, Fis family	1e-08	62
NC_003112:96815:123554	123554	124831	1278	Neisseria meningitidis MC58, complete genome	nitrogen assimilation regulatory protein NtrX	1e-08	62
NC_017505:96293:122199	122199	123476	1278	Neisseria meningitidis alpha710 chromosome, complete genome	nitrogen assimilation regulatory protein NtrX	1e-08	61.6
NC_014623:1633889:1635899	1635899	1636537	639	Stigmatella aurantiaca DW4/3-1 chromosome, complete genome	sigma 54-dependent transcriptional activator	2e-08	61.2
NC_008767:84950:111531	111531	112808	1278	Neisseria meningitidis FAM18, complete genome	putative two-component trancriptional regulator	2e-08	60.8
NC_011205:2621415:2633402	2633402	2634649	1248	Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853	phosphoglycerate transport system transcriptional regulator pgtA	2e-07	58.2
NC_011274:2483038:2497213	2497213	2498460	1248	Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91	phosphoglycerate transport system transcriptional regulator PgtA	2e-07	58.2
NC_011294:2492168:2506314	2506314	2507561	1248	Salmonella enterica subsp. enterica serovar Enteritidis str	phosphoglycerate transport system transcriptional regulatory protein PgtA	2e-07	58.2
NC_012125:1330066:1332062	1332062	1333309	1248	Salmonella enterica subsp. enterica serovar Paratyphi C strain	phosphoglycerate transport system transcriptional regulator PgtA	2e-07	58.2
NC_016831:531404:536417	536417	537664	1248	Salmonella enterica subsp. enterica serovar Gallinarum/pullorum	phosphoglycerate transport system transcriptional regulatory protein PgtA	2e-07	58.2
NC_011083:2542876:2564392	2564392	2565639	1248	Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,	phosphoglycerate transport system transcriptional regulatory proteinpgtA	1e-07	58.2
NC_015276:2948923:2950192	2950192	2951385	1194	Marinomonas mediterranea MMB-1 chromosome, complete genome	transcriptional regulator, AraC family	4e-07	56.6
NC_006511:529424:534438	534438	535685	1248	Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC	phosphoglycerate transport system transcriptional regulatory protein PgtA	4e-07	56.6
NC_011147:529458:534472	534472	535719	1248	Salmonella enterica subsp. enterica serovar Paratyphi A str	phosphoglycerate transport system transcriptional regulatory protein PgtA	4e-07	56.6
NC_014830:335380:361065	361065	362834	1770	Intrasporangium calvum DSM 43043 chromosome, complete genome	GAF modulated sigma54 specific transcriptional regulator, Fis family	2e-06	54.3
NC_009328:3322802:3339345	3339345	3341126	1782	Geobacillus thermodenitrificans NG80-2 chromosome, complete genome	sigma-L-dependent transcriptional regulator	3e-06	53.5
NC_016832:531208:536218	536218	537468	1251	Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,	Phosphoglycerate transport system transcriptional regulatory protein pgtA	4e-06	53.1
NC_004631:531254:536267	536267	537514	1248	Salmonella enterica subsp. enterica serovar Typhi Ty2, complete	phosphoglycerate transport system transcriptional regulatory protein PgtA	4e-06	53.1
NC_003198:2453074:2467198	2467198	2468445	1248	Salmonella enterica subsp. enterica serovar Typhi str. CT18,	phosphoglycerate transport system transcriptional regulatory protein PgtA	4e-06	53.1

*Host Accession, e.g.* NC_0123..**	*Host Description, e.g.* Clostri...**

*Host Lineage, e.g.* archae, Proteo, Firmi...**

*Host Information, e.g.* soil, Thermo, Russia**