Pre_GI Gene

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Host: NC_013316 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013316:1225797 Clostridium difficile R20291, complete genome

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium difficile R20291 was isolated in Stoke Mandeville Hospital, UK in 2006 and is closely related to the North American hypervirulent BI strains. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
12257971226585789electron transfer flavoprotein beta-subunitQuickGO ontologyBLASTP
122659912278191221electron transfer flavoprotein alpha-subunitQuickGO ontologyBLASTP
122783012292211392putative FADFMN-containing dehydrogenaseQuickGO ontologyBLASTP
122948412307641281hypothetical proteinBLASTP
123122712324231197acetate kinaseQuickGO ontologyBLASTP
12325161233040525hypothetical proteinBLASTP
1233065123324117750S ribosomal protein L32QuickGO ontologyBLASTP
12334481234005558DeoR-family transcriptional regulator fatty acid and phospholipid biosynthesis regulatorQuickGO ontologyBLASTP
123401612350381023fatty acidphospholipid synthesis proteinQuickGO ontologyBLASTP
123506412360509873-oxoacyl-acyl-carrier-protein synthase IIIQuickGO ontologyBLASTP
12361591237088930trans-2-enoyl-ACP reductaseQuickGO ontologyBLASTP
12371041238054951malonyl coa-acyl carrier protein transacylaseQuickGO ontologyBLASTP
123805412388037503-oxoacyl-acyl-carrier protein reductaseQuickGO ontologyBLASTP
12388571239081225acyl carrier proteinQuickGO ontologyBLASTP
1239110124034812393-oxoacyl-acyl-carrier-protein synthase IIQuickGO ontologyBLASTP
124057412422921719putative signaling proteinQuickGO ontologyBLASTP
124232312443232001putative sigma-54 dependent transcriptional regulatorQuickGO ontologyBLASTP
12446681244916249hypothetical proteinBLASTP
12449511245676726putative glutamine amidotransferaseQuickGO ontologyBLASTP
124569812470111314putative amino acid permeaseQuickGO ontologyBLASTP
12473101247756447putative acetyltransferaseQuickGO ontologyBLASTP
124784512498301986putative fructose-16-bisphosphataseQuickGO ontologyBLASTP