Pre_GI Gene

Some Help

Host: NC_008253 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008253:2828573 Escherichia coli 536, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (536; O6:K15:H31) is a uropathogenic Escherichia coli (UPEC) that was isolated from a patient with acute pyelonephritis (inflammation of the kidney and pelvis). This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
28285732829445873hydrogenase isoenzymes nickel incorporation protein HypBQuickGO ontologyBLASTP
28294362829708273hydrogenase isoenzymes formation protein HypCQuickGO ontologyBLASTP
282970828308291122hydrogenase isoenzymes formation protein HYpdQuickGO ontologyBLASTP
283082628318361011hydrogenase isoenzymes formation protein HypEQuickGO ontologyBLASTP
283191028339882079formate hydrogenlyase transcriptional activatorQuickGO ontologyBLASTP
28340332834461429putative molybdenum-pterin-binding proteinQuickGO ontologyBLASTP
28345002834844345hypothetical protein YgbAQuickGO ontologyBLASTP
28348992835054156hypothetical protein
28359072836404498hypothetical protein
28364282837312885hypothetical proteinBLASTP
28377172837917201hypothetical protein
283874528397821038transposaseQuickGO ontologyBLASTP
283988428412541371hypothetical proteinBLASTP
28412932842072780putative IS100 transposaseQuickGO ontologyBLASTP
28420722842428357putative transposaseQuickGO ontologyBLASTP
28424882842790303putative transposaseQuickGO ontologyBLASTP
28428172843656840putative transposase proteinQuickGO ontologyBLASTP
28436602844346687putative transposaseQuickGO ontologyBLASTP
28444032844642240hypothetical protein
284485628487073852hypothetical proteinBLASTP
28489762849725750hypothetical proteinBLASTP
284994628525072562DNA mismatch repair protein MutSQuickGO ontologyBLASTP