Pre_GI Gene

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Host: NC_000919 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_000919:545141 Treponema pallidum subsp. pallidum str. Nichols, complete genome

Host Lineage: Treponema pallidum; Treponema; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was originally isolated in 1912 from a neurosyphilitic patient and is virulent. This organism is the causative agent of endemic and venereal syphilis. This sexual transmitted disease was first discovered in Europe at the end of the fifteenth century, however, the causative agent was not identified until 1905. At one time syphilis was the third most commonly reported communicable disease in the USA. Syphilis is characterized by multiple clinical stages and long periods of latent, asymptomatic infection. Although effective therapies have been available since the introduction of penicillin, syphilis remains a global health problem. This organisms is divided into subspecies each of which causes a specific disease. T. pallidum causes the venereal disease syphilis. T. pertenue, T. carateum and T. endemicum cause the skin infections yaws, pinta and bejel, respectively.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
5451415469581818GTP-binding protein LepAQuickGO ontologyBLASTP
547001547627627transcription factor carDQuickGO ontologyBLASTP
5476725488711200hypothetical proteinBLASTP
5489455503451401K transport protein trkAQuickGO ontologyBLASTP
5504595533412883excinuclease ABC subunit A uvrAQuickGO ontologyBLASTP
5533385563132976hypothetical proteinBLASTP
5563275579071581virulence factor mviNQuickGO ontologyBLASTP
557904558494591Holliday junction nuclease ruvCQuickGO ontologyBLASTP
558476559168693hypothetical proteinBLASTP
5591655605411377response regulatory protein atoCQuickGO ontologyBLASTP
5617365630071272DNA polymerase III gamma and tau subunits putativeQuickGO ontologyBLASTP
563018563497480hypothetical proteinBLASTP
5634945646481155UDP-N-glucosamine--N-acetylmuramyl- pentapeptide pyrophosphoryl-undecaprenol N-acetylglucosamine transferase murGQuickGO ontologyBLASTP
5646525672972646ATP-dependent protease LA lon-2QuickGO ontologyBLASTP
567433567996564translation elongation factor P efpQuickGO ontologyBLASTP
5681445701502007ATP-dependent helicase hrpAQuickGO ontologyBLASTP
570198570827630V-type ATPase subunit D atpD-2QuickGO ontologyBLASTP
5709225723641443V-type ATP synthase subunit BQuickGO ontologyBLASTP
5723615741781818V-type ATP synthase subunit AQuickGO ontologyBLASTP
574175574801627V-type ATPase subunit E putativeQuickGO ontologyBLASTP