Pre_GI Gene

Some Help

Host: NC_021182 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_021182:380500 Clostridium pasteurianum BC1, complete genome

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
3809373826431707transcription termination factor RhoQuickGO ontologyBLASTP
382720382932213ribosomal protein L31QuickGO ontologyBLASTP
383103383687585thymidine kinaseQuickGO ontologyBLASTP
383690384667978putative metal-dependent enzymeQuickGO ontologyBLASTP
384828385679852protein-glutamine-N5 methyltransferase release factor-specificQuickGO ontologyBLASTP
3858833869621080peptide chain release factor 1QuickGO ontologyBLASTP
387042387617576hypothetical proteinBLASTP
387708388451744putative divalent heavy-metal cations transporterQuickGO ontologyBLASTP
3885313895831053Sua5YciOYrdCYwlC family proteinQuickGO ontologyBLASTP
389643390095453protein-tyrosine-phosphataseQuickGO ontologyBLASTP
390270390713444ribose 5-phosphate isomerase BQuickGO ontologyBLASTP
390867391496630uracil phosphoribosyltransferaseQuickGO ontologyBLASTP
391698391958261hypothetical protein
3922603935221263Mn2Fe2- transporter NRAMP familyQuickGO ontologyBLASTP
393563393955393hemerythrin-like metal-binding domain-containing proteinQuickGO ontologyBLASTP
3943473960981752transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domainsQuickGO ontologyBLASTP
3962793973851107putative ABC-type transport system periplasmic componentsurface lipoproteinQuickGO ontologyBLASTP
3974053989281524ATPase component of uncharacterized ABC-type transporterQuickGO ontologyBLASTP
3989253999981074ABC-type uncharacterized transport system permease componentQuickGO ontologyBLASTP
399998400927930putative ABC-type transport system permease componentQuickGO ontologyBLASTP