Pre_GI Gene

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Host: NC_011147 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011147:529458 Salmonella enterica subsp. enterica serovar Paratyphi A str

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a clinical isolate collected from a child with paratyphoid fever in Karachi, Pakistan, 2004. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
5294585308491392phosphoglycerate transporter proteinQuickGO ontologyBLASTP
5312855324781194phosphoglycerate transport regulatory protein PgtCQuickGO ontologyBLASTP
5344725357191248phosphoglycerate transport system transcriptional regulatory protein PgtAQuickGO ontologyBLASTP
535987536925939outer membrane proteaseQuickGO ontologyBLASTP
5384065403281923lipopolysaccharide modification acyltransferaseQuickGO ontologyBLASTP
540345540599255bactoprenol glucosyl transferaseQuickGO ontologyBLASTP
540568540957390bactoprenol-linked glucose transferaseQuickGO ontologyBLASTP
542200543141942hypothetical proteinBLASTP
543430544185756VacJ lipoproteinQuickGO ontologyBLASTP
5442465455591314long-chain fatty acid outer membrane transporterQuickGO ontologyBLASTP
545924546208285hypothetical proteinBLASTP
54638554769513113-ketoacyl-CoA thiolaseQuickGO ontologyBLASTP
5476955498422148multifunctional fatty acid oxidation complex subunit alphaQuickGO ontologyBLASTP
550051550536486phosphohistidine phosphataseQuickGO ontologyBLASTP
550636551187552hypothetical proteinBLASTP
5523215534061086chorismate synthaseQuickGO ontologyBLASTP