Pre_GI Gene

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Host: NC_021182 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_021182:3771523 Clostridium pasteurianum BC1, complete genome

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
377152337729501428drug resistance transporter EmrBQacA subfamilyQuickGO ontologyBLASTP
37729923773819828short-chain alcohol dehydrogenaseQuickGO ontologyBLASTP
377427037755471278transposaseQuickGO ontologyBLASTP
37758543776483630transcriptional regulatorQuickGO ontologyBLASTP
37766713777279609acetyltransferase isoleucine patch superfamilyQuickGO ontologyBLASTP
377764637793191674glycosidaseQuickGO ontologyBLASTP
37808563781497642putative dithiol-disulfide isomerase involved in polyketide biosynthesisQuickGO ontologyBLASTP
37816083781829222hypothetical proteinBLASTP
37821043782739636dihydroxyacetone kinase phosphoprotein-dependent L subunitQuickGO ontologyBLASTP
378276137837651005dihydroxyacetone kinaseQuickGO ontologyBLASTP
37837873784449663ribulose-5-phosphate 4-epimerase-like epimerase or aldolaseQuickGO ontologyBLASTP
378446837858231356phosphotransferase system galactitol-specific IIC componentQuickGO ontologyBLASTP
37859333786214282phosphotransferase system galactitol-specific IIB componentQuickGO ontologyBLASTP
37862523786719468phosphotransferase system mannitolfructose-specifc IIA component Ntr-typeQuickGO ontologyBLASTP
37869943787860867putative metal-dependent phosphoesterase PHP familyQuickGO ontologyBLASTP
37881903788378189hypothetical protein
378840337911982796transcriptional antiterminatorQuickGO ontologyBLASTP
379140437926181215gamma-aminobutyrate permease-like transporterQuickGO ontologyBLASTP
37928893793779891transcriptional regulatorQuickGO ontologyBLASTP