Pre_GI Gene

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Host: NC_009092 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009092:3682413 Shewanella loihica PV-4, complete genome

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
36824133682790378hypothetical proteinBLASTP
368305436844781425aldehyde dehydrogenaseQuickGO ontologyBLASTP
36844923685076585transcriptional regulator TetR familyQuickGO ontologyBLASTP
36850783685959882transcriptional regulator LysR familyQuickGO ontologyBLASTP
36860703686741672ThiJPfpI domain proteinQuickGO ontologyBLASTP
368690336880601158peptidase M19 renal dipeptidaseQuickGO ontologyBLASTP
36893183689875558hypothetical protein
36904453691314870protein of unknown function DUF6 transmembraneQuickGO ontologyBLASTP
36916593691868210hypothetical proteinBLASTP
36919803692801822NAD-dependent epimerasedehydrataseQuickGO ontologyBLASTP
369326036950501791flavocytochrome cQuickGO ontologyBLASTP
369544936974131965histidine kinaseQuickGO ontologyBLASTP
369742336988111389two component sigma54 specific transcriptional regulator Fis familyQuickGO ontologyBLASTP
369887337001861314sodiumdicarboxylate symporterQuickGO ontologyBLASTP
370072337019431221hypothetical proteinBLASTP