Pre_GI Gene

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Host: NC_009092 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009092:1504363 Shewanella loihica PV-4, complete genome

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
150436315082443882phosphoribosylformylglycinamidine synthaseQuickGO ontologyBLASTP
150948715110431557cytochrome bd ubiquinol oxidase subunit IQuickGO ontologyBLASTP
151105915121981140cytochrome d ubiquinol oxidase subunit IIQuickGO ontologyBLASTP
15122131512329117cyd operon protein YbgTQuickGO ontologyBLASTP
15129021513342441HNH endonucleaseQuickGO ontologyBLASTP
15139101514731822CMPdCMP deaminase zinc-bindingQuickGO ontologyBLASTP
151484815160231176hypothetical proteinBLASTP
151615015173821233hypothetical protein
15174181517603186BLASTP
151853515205382004methyl-accepting chemotaxis sensory transducerQuickGO ontologyBLASTP
152073715238083072acriflavin resistance proteinQuickGO ontologyBLASTP
152381215249271116efflux transporter RND family MFP subunitQuickGO ontologyBLASTP
15250701525681612transcriptional regulator TetR familyQuickGO ontologyBLASTP
15258951526809915hypothetical proteinBLASTP
15269491527521573hypothetical proteinBLASTP
15275541528033480hypothetical proteinBLASTP
152814215306222481Tetratricopeptide TPR_2 repeat proteinQuickGO ontologyBLASTP
15310541532052999polysaccharide biosynthesis protein CapDQuickGO ontologyBLASTP
153205215332181167DegTDnrJEryC1StrS aminotransferaseQuickGO ontologyBLASTP
153320215344071206Methyltransferase type 12QuickGO ontologyBLASTP
153440815355981191Methyltransferase type 12QuickGO ontologyBLASTP
15356091536337729short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
153633715374791143acyl-CoA synthetases AMP-formingAMP-acid ligases II-like proteinQuickGO ontologyBLASTP
15374791537724246hypothetical protein
15377211538287567acetyltransferase-like proteinQuickGO ontologyBLASTP
15382971539058762short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
15390771539310234hypothetical protein
15393951540132738acylneuraminate cytidylyltransferaseQuickGO ontologyBLASTP
154013315412091077N-acylneuraminate-9-phosphate synthaseQuickGO ontologyBLASTP
154121115423201110Rieske 2Fe-2S domain proteinQuickGO ontologyBLASTP
154231715433871071Spore coat polysaccharide biosynthesis protein predicted glycosyltransferase-likeQuickGO ontologyBLASTP
15433651544117753short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
1544117154520810923-oxoacyl-acyl-carrier-protein synthaseQuickGO ontologyBLASTP
1545341154636310233-oxoacyl-acyl-carrier-protein synthaseQuickGO ontologyBLASTP
15463461546609264hypothetical proteinBLASTP
154660615479011296hypothetical proteinBLASTP
154810415492641161hypothetical proteinBLASTP
15496661550292627hypothetical proteinBLASTP
15502891550735447protein of unknown function DUF400QuickGO ontologyBLASTP
15508141551239426FlgN family proteinQuickGO ontologyBLASTP
15512501551567318anti-sigma-28 factor FlgMQuickGO ontologyBLASTP
15516881552395708SAF domain proteinQuickGO ontologyBLASTP
15526051553525921response regulator receiver modulated CheW proteinQuickGO ontologyBLASTP
15536691554502834MCP methyltransferase CheR-typeQuickGO ontologyBLASTP
15546911555089399flagellar basal-body rod protein FlgBQuickGO ontologyBLASTP
15550921555511420flagellar basal-body rod protein FlgCQuickGO ontologyBLASTP
15555221556304783flagellar hook capping proteinQuickGO ontologyBLASTP
155636815577291362flagellar basal body FlaE domain proteinQuickGO ontologyBLASTP
15579291558672744flagellar basal-body rod protein FlgFQuickGO ontologyBLASTP
15586831559471789flagellar basal-body rod protein FlgGQuickGO ontologyBLASTP
15594811560185705flagellar L-ring proteinQuickGO ontologyBLASTP
156019715612881092flagellar P-ring proteinQuickGO ontologyBLASTP
156133615623611026flagellar rod assembly proteinmuramidase FlgJQuickGO ontologyBLASTP
156242615643421917flagellar hook-associated protein FlgKQuickGO ontologyBLASTP
156435415655441191flagellar hook-associated protein 3QuickGO ontologyBLASTP
15656321566453822flagellin domain proteinQuickGO ontologyBLASTP
15666901567508819flagellin domain proteinQuickGO ontologyBLASTP
15676131568002390flagellar protein FlaG proteinQuickGO ontologyBLASTP
156803315694061374flagellar hook-associated 2 domain proteinQuickGO ontologyBLASTP
15694341569754321hypothetical protein
15697611570171411flagellar protein FliSQuickGO ontologyBLASTP
157043815718711434sigma54 specific transcriptional regulator Fis familyQuickGO ontologyBLASTP
157202715731151089PASPAC sensor signal transduction histidine kinaseQuickGO ontologyBLASTP
157310815744511344two component sigma54 specific transcriptional regulator Fis familyQuickGO ontologyBLASTP
15746481574980333flagellar hook-basal body complex subunit FliEQuickGO ontologyBLASTP
157503915767361698flagellar M-ring protein FliFQuickGO ontologyBLASTP
157672915777721044flagellar motor switch protein FliGQuickGO ontologyBLASTP
157777215787911020flagellar assembly protein FliHQuickGO ontologyBLASTP
157876315801031341flagellar protein export ATPase FliIQuickGO ontologyBLASTP