Pre_GI Gene

Some Help

Host: NC_011748 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011748:3196173 Escherichia coli 55989, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from the diarrheagenic stools of an HIV-positive adult suffering from persistent watery diarrhea in Central African Republic. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
31961733197108936DNA-binding transcriptional regulator LysRQuickGO ontologyBLASTP
31970953197787693putative racemaseQuickGO ontologyBLASTP
319791631993341419arabinose transporterQuickGO ontologyBLASTP
319964932004107622-deoxy-D-gluconate 3-dehydrogenaseQuickGO ontologyBLASTP
320044032012768375-keto-4-deoxyuronate isomeraseQuickGO ontologyBLASTP
320156332027441182acetyl-CoA acetyltransferaseQuickGO ontologyBLASTP
320299932042281230putative transporterQuickGO ontologyBLASTP
32046883205320633conserved hypothetical protein putative bipartite regulator domainQuickGO ontologyBLASTP
32056543206463810putative transcriptional regulatorQuickGO ontologyBLASTP
32064563206938483hypothetical proteinBLASTP
32070873207512426hypothetical proteinBLASTP
32077063208143438hypothetical proteinBLASTP
32084213208912492putative chaperoneQuickGO ontologyBLASTP
320924732106231377transcriptional regulatorQuickGO ontologyBLASTP
32107913211009219hypothetical proteinBLASTP
32110923211568477putative peptidoglycan-binding-like protein precursorQuickGO ontologyBLASTP
32116133212059447BLASTP
32120903212245156BLASTP
32124663212897432hypothetical proteinBLASTP
32131143213695582hypothetical proteinBLASTP
32137113214445735Putative Type III secretion system lipoprotein EprKQuickGO ontologyBLASTP
32144863214701216BLASTP
32148783215033156Putative Type III secretion EprI proteinQuickGO ontologyBLASTP
321504732162371191Putative Type III secretion EprH proteinQuickGO ontologyBLASTP
32164863216986501conserved hypothetical protein putative response regulator containing a CheY-like receiver domain and an HTH DNA-binding domainQuickGO ontologyBLASTP
32169883217281294hypothetical proteinBLASTP
32173433217735393BLASTP
32177323217935204BLASTP
32180083218499492BLASTP
32185083219275768putative Type III secretion protein EpaRQuickGO ontologyBLASTP
32192773219537261BLASTP
32195473220212666surface presentation of antigens protein SpaPQuickGO ontologyBLASTP
32201273220774648BLASTP
32207843221149366BLASTP
322128132229331653hypothetical proteinBLASTP
3223125322319874tRNA-GlyQuickGO ontologyBLASTP
32232773224032756Tetratricopeptide repeat transcriptional regulatorQuickGO ontologyBLASTP
322448632267442259xanthine dehydrogenase subunit XdhAQuickGO ontologyBLASTP
32267553227633879xanthine dehydrogenase subunit XdhBQuickGO ontologyBLASTP
32276303228109480xanthine dehydrogenase subunit XdhCQuickGO ontologyBLASTP
322814932299271779putative DNA-binding transcriptional regulatorQuickGO ontologyBLASTP
323040332315931191aspartateornithine carbamoyltransferase family proteinQuickGO ontologyBLASTP
323165132328471197diaminopropionate ammonia-lyaseQuickGO ontologyBLASTP