Pre_GI Gene

Some Help

Host: NC_010498 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010498:4967724 Escherichia coli SMS-3-5, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli SMS-3-5 was isolated from a toxic-metal contaminated site, Shipyard Creek, Charleston, South Carolina, USA. This strain is highly resistant to a number of antibiotics. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
496772449689921269major facilitator family protein CglTQuickGO ontologyBLASTP
496901049703741365dihydrolipoamide dehydrogenase CglEQuickGO ontologyBLASTP
497067549722161542putative carnitine transporter CglCQuickGO ontologyBLASTP
497227249734141143glycerate kinase GcxKQuickGO ontologyBLASTP
497348949743768882-hydroxy-3-oxopropionate reductase GcxRQuickGO ontologyBLASTP
49743944975176783hydroxypyruvate isomerase GcxlQuickGO ontologyBLASTP
497518949769281740glyoxylate carboligase GcxCQuickGO ontologyBLASTP
497730749792561950putative regulatory protein IbeRQuickGO ontologyBLASTP
497954349809131371invasion protein IbeAQuickGO ontologyBLASTP
498092849823311404NaH antiporter IbeTQuickGO ontologyBLASTP
49824184983329912LysR family transcriptional regulatorQuickGO ontologyBLASTP
498339449845661173beta-aspartyl peptidaseQuickGO ontologyBLASTP
49845794985040462hypothetical proteinBLASTP
49850374985720684putative transporterQuickGO ontologyBLASTP
49857504985905156hypothetical protein
49859704986554585RNA 2-phosphotransferaseQuickGO ontologyBLASTP
498667549919155241putative invasinQuickGO ontologyBLASTP