Pre_GI Gene

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Host: NC_011353 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011353:3805819 Escherichia coli O157:H7 str. EC4115 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is associated with Hamburger disease, which is caused by the contamination of meat products by enterohemorrhagic E. coli (EHEC). The identifier O157:H7 refers to the serotype of EHEC, and reflects the specific antigenic markers found on the surface of the cell. EHEC attaches and effaces to cells in the large intestine. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
38058193806754936DNA-binding transcriptional regulator LysRQuickGO ontologyBLASTP
38067413807433693racemaseQuickGO ontologyBLASTP
380756238089801419arabinose-proton symporterQuickGO ontologyBLASTP
380929538100567622-deoxy-D-gluconate 3-dehydrogenaseQuickGO ontologyBLASTP
381008638109228375-keto-4-deoxyuronate isomeraseQuickGO ontologyBLASTP
381120938123901182acetyl-CoA acetyltransferaseQuickGO ontologyBLASTP
381264538138741230serine transporter family proteinQuickGO ontologyBLASTP
38143973814966570hypothetical proteinBLASTP
38153003816109810transcriptional regulatorQuickGO ontologyBLASTP
38162713816585315hypothetical proteinBLASTP
38166183816743126hypothetical proteinBLASTP
38172993817535237hypothetical proteinBLASTP
38175893818080492BLASTP
38182123818334123hypothetical protein
38183063818797492hypothetical proteinBLASTP
381913138205071377transcriptional regulatorQuickGO ontologyBLASTP
38206743820892219hypothetical proteinBLASTP
38209773821480504lytic transglycosylase PilTQuickGO ontologyBLASTP
38214993822131633LuxR family transcriptional regulatorQuickGO ontologyBLASTP
38221103822277168hypothetical proteinBLASTP
38223543822785432hypothetical proteinBLASTP
38228023823011210BLASTP
38230043823159156hypothetical proteinBLASTP
38236013824335735type III secretion apparatus lipoprotein EprKQuickGO ontologyBLASTP
38243323824664333type III secretion apparatus protein EprJQuickGO ontologyBLASTP
38246843824923240type III secretion apparatus needle proteinQuickGO ontologyBLASTP
38249373825671735BLASTP
38256803825817138hypothetical protein
38263753826875501LuxR family transcriptional regulatorQuickGO ontologyBLASTP
382723238283531122surface presentation of antigens protein SpaSQuickGO ontologyBLASTP
38283623828556195BLASTP
38286773829144468BLASTP
38291313829391261type III secretion apparatus protein EpaQQuickGO ontologyBLASTP
38294023830067666surface presentation of antigens protein SpaPQuickGO ontologyBLASTP
38300573831043987BLASTP
38310033831572570type III secretion apparatus proteinQuickGO ontologyBLASTP
38316453831878234BLASTP
38318563832323468protein EivIQuickGO ontologyBLASTP
383230438335961293ATP synthase SpaLQuickGO ontologyBLASTP
383362838356882061type III secretion protein HrcV familyQuickGO ontologyBLASTP
383568138368261146protein EivEQuickGO ontologyBLASTP
383683138385341704type III secretion outer membrane pore YscCHrcC familyQuickGO ontologyBLASTP
38385313839280750protein EivFQuickGO ontologyBLASTP
38396263839805180hypothetical proteinBLASTP
383987238408971026BLASTP
38409143841477564BLASTP
3841710384178576tRNA-GlyQuickGO ontologyBLASTP
38418633842618756peptidase M23B familyQuickGO ontologyBLASTP
384303438453312298xanthine dehydrogenase subunit XdhAQuickGO ontologyBLASTP
38453423846220879xanthine dehydrogenase subunit XdhBQuickGO ontologyBLASTP
38462173846696480xanthine dehydrogenase subunit XdhCQuickGO ontologyBLASTP
384673638485141779Fis family sigma-54 dependent transcriptional regulatorQuickGO ontologyBLASTP
384899038501801191aspartateornithine carbamoyltransferase family proteinQuickGO ontologyBLASTP
385023838514341197diaminopropionate ammonia-lyaseQuickGO ontologyBLASTP