Pre_GI Gene

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Host: NC_013315 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013315:3532721 Clostridium difficile CD196 chromosome, complete genome

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from a single patient with pseudomembranous colitis in a Paris hospital in 1985. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
353272135337281008glyceraldehyde-3-phosphate dehydrogenase 2QuickGO ontologyBLASTP
353378835348101023central glycolytic genes regulatorQuickGO ontologyBLASTP
353560735369531347RNA polymerase sigma-54 factorQuickGO ontologyBLASTP
353710535396662562xanthine dehydrogenase molybdenum binding and iron-sulfur binding subunitsQuickGO ontologyBLASTP
353966035410511392D-hydantoinaseQuickGO ontologyBLASTP
354133435424431110dihydroorotate dehydrogenase catalytic subunitQuickGO ontologyBLASTP
354263535439871353xanthine permeaseQuickGO ontologyBLASTP
354418635455141329chlorohydrolaseaminohydrolaseQuickGO ontologyBLASTP
354554235471251584D-aminoacylaseQuickGO ontologyBLASTP
354714135483281188peptidaseQuickGO ontologyBLASTP
354866135498751215diaminopropionate ammonia-lyaseQuickGO ontologyBLASTP
35504983551037540hypothetical proteinBLASTP
355111435529311818sigma54-dependent transcriptional regulatorQuickGO ontologyBLASTP