Pre_GI Gene

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Host: NC_011769 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011769:787496 Desulfovibrio vulgaris str. 'Miyazaki F', complete genome

Host Lineage: Desulfovibrio vulgaris; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: Desulfovibrio vulgaris str. 'Miyazaki F' has one of the best characterized nickel/iron hydrogenases. A sulfate reducing bacterium. These organisms typically grow anaerobically, although some can tolerate oxygen, and they utilize a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making these organisms of interest as bioremediators. Metal corrosion, a problem that is partly the result of the collective activity of these bacteria, produces billions of dollars in losses each year to the petroleum industry. These organisms are also responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products. This species is a sulfate reducer commonly found in a variety of soil and aquatic environments.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
7874967891181623Amidohydrolase 3QuickGO ontologyBLASTP
7897217907731053ABC transporter relatedQuickGO ontologyBLASTP
7908717921661296extracellular solute-binding protein family 1QuickGO ontologyBLASTP
792406793299894binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
793296794129834binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
794202795071870hypothetical protein
795804796769966PatatinQuickGO ontologyBLASTP
7968547989142061integral membrane sensor signal transduction histidine kinaseQuickGO ontologyBLASTP
7990018002781278Coenzyme F390 synthetase-like proteinQuickGO ontologyBLASTP
800340801338999Uncharacterized protein involved in methicillin resistance-like proteinQuickGO ontologyBLASTP
8013358027591425OrnDAPArg decarboxylase 2QuickGO ontologyBLASTP
8027778039371161protein of unknown function DUF201QuickGO ontologyBLASTP
8039348051001167hypothetical proteinBLASTP
8050978061071011hypothetical protein
8061638073441182ATP-grasp protein-like proteinQuickGO ontologyBLASTP
8073478096892343hypothetical proteinBLASTP
8097648111251362two component sigma54 specific transcriptional regulator Fis familyQuickGO ontologyBLASTP
811100811831732EpsI family proteinQuickGO ontologyBLASTP