Pre_GI Gene

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Host: NC_007912 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007912:2768363 Saccharophagus degradans 2-40, complete genome

Host Lineage: Saccharophagus degradans; Saccharophagus; Alteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is a marine gamma-proteobacterium that was isolated from decaying Spartina alterniflora, a salt marsh cord grass, in the Chesapeake Bay, USA. Saccharophagus degradans 2-40 has been used to produce ethanol from plant material and may be useful for the production bioethanol. Bacterium able to degrade complex carbohydrates. Saccharophagus degradans is capable of degrading insoluble complex carbohydrates through the collective action of enzyme complexes found on its cell surfaces, utilizing the degradation products as a carbon source. This organism may be useful in bioremediation. The degradative enzymes this organism produces are typically exoenzymes that are collected and organized into large surface complexes termed cellulosomes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
27679632768370408surface presentation of antigens SpoA proteinQuickGO ontologyBLASTP
276836327693641002Flagellar basal body rod proteinQuickGO ontologyBLASTP
27693782769920543flagellar basal body-associated protein FliLQuickGO ontologyBLASTP
277017727716341458Flagellar hook-length control protein-likeQuickGO ontologyBLASTP
27718882772229342hypothetical proteinBLASTP
277223527739621728Flagellar basal-body rod protein FlgCQuickGO ontologyBLASTP
27740412774430390Flagellar basal-body rod protein FlgBQuickGO ontologyBLASTP
277462127759671347MCP methyltransferase CheR-typeQuickGO ontologyBLASTP
277596427779942031CheW-like proteinQuickGO ontology
277809727797881692Transcriptional regulators-likeQuickGO ontologyBLASTP
27798472780278432flagellar protein FliJ putativeQuickGO ontology
278027127816471377Sodium-transporting two-sector ATPaseQuickGO ontologyBLASTP
278163427826831050Flagellar biosynthesistype III secretory pathway protein-likeQuickGO ontologyBLASTP
278278327838231041flagellar motor switch protein FliGQuickGO ontologyBLASTP
278382027854901671flagellar M-ring proteinQuickGO ontologyBLASTP
27856032785968366hypothetical proteinBLASTP
27863502786526177hypothetical protein
278684827883411494diguanylate cyclasephosphodiesterase GGDEF EAL domains with PASPAC sensorsQuickGO ontologyBLASTP
278833427896621329two-component sensorQuickGO ontologyBLASTP