Pre_GI Gene

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Host: NC_018080 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_018080:5192264 Pseudomonas aeruginosa DK2 chromosome, complete genome

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
51915395192267729multicopper polyphenol oxidaseQuickGO ontologyBLASTP
51922645193226963pseudouridine synthaseQuickGO ontologyBLASTP
519337251943971026competence protein ComLQuickGO ontologyBLASTP
51945545194799246hypothetical proteinBLASTP
519478951963811593two-component sensor PilSQuickGO ontologyBLASTP
519639651977331338two-component response regulator PilRQuickGO ontologyBLASTP
519777951988551077D-amino acid oxidaseQuickGO ontologyBLASTP
51990135199513501type 4 fimbrial biogenesis protein FimTQuickGO ontologyBLASTP
51994985200124627type 4 fimbrial biogenesis protein FimUQuickGO ontologyBLASTP
52001345200658525type IV pilus modification protein PilVQuickGO ontologyBLASTP
52006675201482816type 4 fimbrial biogenesis protein PilWQuickGO ontologyBLASTP
52014795202084606type 4 fimbrial biogenesis protein PilXQuickGO ontologyBLASTP
520209852055743477type 4 fimbrial biogenesis protein PilY1QuickGO ontologyBLASTP
52055775205903327hypothetical proteinBLASTP
52059005206325426type 4 fimbrial biogenesis protein PilEQuickGO ontologyBLASTP
520639452073389454-hydroxy-3-methylbut-2-enyl diphosphate reductaseQuickGO ontologyBLASTP
52074245207864441FKBP-type peptidyl-prolyl cis-trans isomerase SlpAQuickGO ontologyBLASTP
52078575208366510lipoprotein signal peptidaseQuickGO ontologyBLASTP
520835952111902832isoleucyl-tRNA synthetaseQuickGO ontologyBLASTP
52112145212152939bifunctional riboflavin kinaseFMN adenylyltransferaseQuickGO ontologyBLASTP
521224952137871539virulence factor membrane proteinQuickGO ontologyBLASTP
5214071521434627630S ribosomal protein S20QuickGO ontologyBLASTP
52144135214877465hypothetical proteinBLASTP
521488952160071119gamma-glutamyl kinaseQuickGO ontologyBLASTP
521607852172981221GTPase CgtAQuickGO ontologyBLASTP
5217440521769725850S ribosomal protein L27QuickGO ontologyBLASTP
5217721521803231250S ribosomal protein L21QuickGO ontologyBLASTP
52182735219241969octaprenyl-diphosphate synthaseQuickGO ontologyBLASTP
52193795219603225hypothetical proteinBLASTP
521994652219732028cytochrome cQuickGO ontologyBLASTP