Pre_GI Gene

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Host: NC_011083 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011083:2542876 Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a multidrug resistant strain. Salmonella enterica subsp. enterica serovar Heidelberg is one of the more common serovars causing disease in the USA. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
254287625450232148fatty oxidation complex alpha subunit FadJQuickGO ontologyBLASTP
254502325463331311acetyl-CoA C-acyltransferase FadIQuickGO ontologyBLASTP
25465102546794285hypothetical proteinBLASTP
25469012547041141hypothetical protein
254715925484721314long-chain fatty acid transport proteinQuickGO ontologyBLASTP
25485332549288756lipoprotein VacJ familyQuickGO ontologyBLASTP
25495772550518942inner membrane protein YfdCQuickGO ontologyBLASTP
255078125520101230integraseQuickGO ontologyBLASTP
255202525537461722hypothetical proteinBLASTP
255402025554501431hypothetical protein
25555992555712114hypothetical protein
255645325591402688zinc-binding domain of primase-helicase familyQuickGO ontologyBLASTP
25591372559547411hypothetical proteinBLASTP
25595402559776237hypothetical proteinBLASTP
25597732560168396phage immunity repressor proteinQuickGO ontologyBLASTP
256045225614561005major capsid proteinQuickGO ontologyBLASTP
25614792562339861hypothetical proteinBLASTP
25631862564124939protease 7QuickGO ontologyBLASTP
256439225656391248phosphoglycerate transport system transcriptional regulatory proteinpgtAQuickGO ontologyBLASTP
256562925676352007phosphoglycerate transport system sensor protein PgtBQuickGO ontologyBLASTP
256763225688551224phosphoglycerate transport protein for signal transmissionQuickGO ontologyBLASTP