Pre_GI Gene

Some Help

Host: NC_016830 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016830:4010637 Pseudomonas fluorescens F113 chromosome, complete genome

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
401063740117101074acyl-CoA dehydrogenase short-chain specificQuickGO ontologyBLASTP
40117074012507801Enoyl-CoA hydrataseQuickGO ontologyBLASTP
401255040136741125acyl-CoA dehydrogenase short-chain specificQuickGO ontologyBLASTP
40136994014250552glutathione peroxidaseQuickGO ontologyBLASTP
40142534015113861Pantoate--beta-alanine ligaseQuickGO ontologyBLASTP
40152024016059858methyl-accepting chemotaxis proteinQuickGO ontologyBLASTP
401606640172711206major facilitator superfamily transporterQuickGO ontologyBLASTP
40174444018088645TetR family transcriptional regulatorQuickGO ontologyBLASTP
40181574018474318hypothetical proteinBLASTP
401871640201041389type I secretion outer membrane proteinQuickGO ontologyBLASTP
402010140211261026Multidrug resistance efflux pumpQuickGO ontologyBLASTP
40212784022219942major facilitator superfamily transporterQuickGO ontologyBLASTP
40226214022848228hypothetical protein
402502140267061686protein NosR2QuickGO ontologyBLASTP
402691640287091794nitrous-oxide reductaseQuickGO ontologyBLASTP
40292374030037801protein NosD2QuickGO ontologyBLASTP
40300344030957924protein NosF2QuickGO ontologyBLASTP
40309544031784831protein NosY2QuickGO ontologyBLASTP
40318094032318510protein NosL2QuickGO ontologyBLASTP
40324414032641201cytochrome c class IQuickGO ontologyBLASTP
403438940364102022protein NorD2QuickGO ontologyBLASTP
40364114037226816denitrification regulatory proteinQuickGO ontologyBLASTP
403724140386081368protein NorB2QuickGO ontologyBLASTP
40386244039481858protein NorC2QuickGO ontologyBLASTP
40417774041974198protein NosRQuickGO ontologyBLASTP
40423164042618303hypothetical proteinBLASTP
404286240440641203cytochrome P450QuickGO ontologyBLASTP
404418840457111524protein NorR2QuickGO ontologyBLASTP
404587040473121443protein NorVQuickGO ontologyBLASTP
404730940484421134protein NorWQuickGO ontologyBLASTP