Pre_GI Gene

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Host: NC_009092 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009092:1874888 Shewanella loihica PV-4, complete genome

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
187488818767021815lipid A ABC exporter fused ATPase and inner membrane subunits MsbAQuickGO ontologyBLASTP
187670818777241017tetraacyldisaccharide 4-kinaseQuickGO ontologyBLASTP
18777261877905180protein of unknown function DUF343QuickGO ontologyBLASTP
18781411878860720Mn2-dependent serinethreonine protein kinaseQuickGO ontologyBLASTP
187936018824283069Peptidase M11 gametolysinQuickGO ontologyBLASTP
188251218848002289hypothetical proteinBLASTP
18853521886140789DSBA oxidoreductaseQuickGO ontologyBLASTP
188617418875441371sigma54 specific transcriptional regulator Fis familyQuickGO ontologyBLASTP
18880211888899879beta-lactamase domain proteinQuickGO ontologyBLASTP
188901118920583048acriflavin resistance proteinQuickGO ontologyBLASTP
189205518953033249acriflavin resistance proteinQuickGO ontologyBLASTP
189531818963821065efflux transporter RND family MFP subunitQuickGO ontologyBLASTP
189713118984171287citrate synthase IQuickGO ontologyBLASTP
18988301899225396succinate dehydrogenase cytochrome b subunitQuickGO ontologyBLASTP
18992191899566348conserved hypothetical succinate dehydrogenase hydrophobic subunitQuickGO ontologyBLASTP
189956719013331767succinate dehydrogenase flavoprotein subunitQuickGO ontologyBLASTP
19013441902051708succinate dehydrogenase and fumarate reductase iron-sulfur proteinQuickGO ontologyBLASTP
1902267190508928232-oxoglutarate dehydrogenase E1 subunitQuickGO ontologyBLASTP
1905122190631211912-oxoglutarate dehydrogenase E2 subunit dihydrolipoamide succinyltransferaseQuickGO ontologyBLASTP
190641619075821167succinyl-CoA synthetase beta subunitQuickGO ontologyBLASTP
19075821908454873succinyl-CoA synthetase alpha subunitQuickGO ontologyBLASTP
190854019102131674ferredoxin-dependent glutamate synthaseQuickGO ontologyBLASTP
19104341910934501GCN5-related N-acetyltransferaseQuickGO ontologyBLASTP
19110251911456432ferric uptake regulator Fur familyQuickGO ontologyBLASTP
19117671912513747Silent information regulator protein Sir2QuickGO ontologyBLASTP
19125711913092522hypothetical proteinBLASTP
19131331913420288hypothetical proteinBLASTP
19135161914202687peptidase S51 dipeptidase EQuickGO ontologyBLASTP