Pre_GI Gene

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Host: NC_009831 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009831:66518 Shewanella sediminis HAW-EB3, complete genome

Host Lineage: Shewanella sediminis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella sediminis was isolated from sediment taken at a depth of 215 meters from an unexploded-ordinance-dumping site 50 nautical miles from Halifax Harbor, Canada in the Atlantic Ocean. This organism is able to degrade hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) anaerobically at 10 degrees C. RDX is a member of a family of nitramine compounds which are used in the production of explosives. Shewanella are facultatively anaerobic, Gram-negative bacteria, motile by polar flagella, rod-like, and generally associated with aquatic or marine environments.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
66518678941377flagellar hook-associated 2 domain proteinQuickGO ontologyBLASTP
6829169085795flagellin domain proteinQuickGO ontologyBLASTP
69675707001026hypothetical proteinBLASTP
7071071627918flagellar hook-associated protein 3QuickGO ontologyBLASTP
71640730131374flagellar hook-associated protein FlgKQuickGO ontologyBLASTP
7308073517438hypothetical proteinBLASTP
73517746441128flagellar P-ring proteinQuickGO ontologyBLASTP
7473975401663flagellar L-ring proteinQuickGO ontologyBLASTP
7544676231786flagellar basal-body rod protein FlgGQuickGO ontologyBLASTP
7630277036735flagellar basal-body rod protein FlgFQuickGO ontologyBLASTP
77047782431197flagellar basal body FlaEQuickGO ontologyBLASTP
7827278937666flagellar hook capping proteinQuickGO ontologyBLASTP
7900379422420flagellar basal-body rod protein FlgCQuickGO ontologyBLASTP
7952179871351flagellar basal-body rod protein FlgBQuickGO ontologyBLASTP
7995880704747SAF domainQuickGO ontologyBLASTP
8078081064285hypothetical protein
8106781504438hypothetical protein
8151781951435hypothetical protein
81966833091344ATPase FliIYscN familyQuickGO ontologyBLASTP
8329984057759flagellar assembly protein FliHQuickGO ontologyBLASTP
84057850701014flagellar motor switch protein FliGQuickGO ontologyBLASTP
85129868411713flagellar M-ring protein FliFQuickGO ontologyBLASTP
8693887276339flagellar hook-basal body complex subunit FliEQuickGO ontologyBLASTP
87319886201302sigma54 specific transcriptional regulator fis familyQuickGO ontologyBLASTP
8860789521915hypothetical proteinBLASTP