Pre_GI Gene

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Host: NC_015703 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015703:3842144 Runella slithyformis DSM 19594 chromosome, complete genome

Host Lineage: Runella slithyformis; Runella; Cytophagaceae; Cytophagales; Bacteroidetes; Bacteria

General Information: Environment: Fresh water, Host; Isolation: Fresh water lake; USA, Louisiana, Baton; Temp: Psychrophile. This is a species of curved, nonflexible, pink bacteria. The species is of interest because it is able to grow at temperatures as low as 4°C. The species epithet is derived from slithy, a nonsense word from Lewis Carroll's Jabberwocky for a fictional organism that is 'slithy' and the Latin word 'suffix' meaning '-like, in the shape of', yielding the Neo-Latin word 'slithyformis' meaning 'slithy in form'.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
38419183842193276histone family protein DNA-binding proteinQuickGO ontologyBLASTP
38421443842602459hypothetical proteinBLASTP
38426303843199570cyclic nucleotide-binding proteinQuickGO ontologyBLASTP
38435383843786249hypothetical protein
38438543844825972Serine racemaseQuickGO ontologyBLASTP
38449413845531591tRNA-hydroxylaseQuickGO ontologyBLASTP
384594838472881341NADH dehydrogenase ubiquinoneQuickGO ontologyBLASTP
38474823847953472BLASTP
38480013848183183hypothetical protein
384828338497941512hypothetical proteinBLASTP
38498343850385552helix-turn-helix domain-containing proteinQuickGO ontologyBLASTP
38503363850440105hypothetical protein
38504733850694222hypothetical proteinBLASTP
385076738520411275integrase family proteinQuickGO ontologyBLASTP
385215438533351182hypothetical proteinBLASTP
38536853854557873mobilizable transposon excision proteinQuickGO ontologyBLASTP
38547293854947219hypothetical protein
385498938564671479RNA-directed DNA polymeraseQuickGO ontologyBLASTP
38570803857193114hypothetical protein
3857277385736690tRNA-SerQuickGO ontology
385768338588431161hypothetical protein
38588553859208354Hpt domain-containing proteinQuickGO ontologyBLASTP
385925338606081356Fis family two component sigma-54 specific transcriptional regulatorQuickGO ontologyBLASTP
38608683861758891AraC family transcriptional regulatorQuickGO ontologyBLASTP
38618943862625732hypothetical proteinBLASTP
386262238640041383oxidoreductase domain-containing proteinQuickGO ontologyBLASTP
38640223864912891Xylose isomerase domain-containing protein TIM barrelQuickGO ontology
38649153865143229
38651583865946789phytanoyl-CoA dioxygenaseQuickGO ontologyBLASTP
38660383866850813Xylose isomerase domain-containing protein TIM barrelQuickGO ontologyBLASTP
386724638680107653-oxoacyl-acyl-carrier-protein reductaseQuickGO ontologyBLASTP
38682113868486276
386848938696341146L-lactate dehydrogenase cytochromeQuickGO ontologyBLASTP