Pre_GI Gene

Some Help

Host: NC_011769 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011769:820521 Desulfovibrio vulgaris str. 'Miyazaki F', complete genome

Host Lineage: Desulfovibrio vulgaris; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: Desulfovibrio vulgaris str. 'Miyazaki F' has one of the best characterized nickel/iron hydrogenases. A sulfate reducing bacterium. These organisms typically grow anaerobically, although some can tolerate oxygen, and they utilize a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making these organisms of interest as bioremediators. Metal corrosion, a problem that is partly the result of the collective activity of these bacteria, produces billions of dollars in losses each year to the petroleum industry. These organisms are also responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products. This species is a sulfate reducer commonly found in a variety of soil and aquatic environments.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
8205218218401320hypothetical proteinBLASTP
8218598229981140glycosyl transferase family 2QuickGO ontologyBLASTP
8229988243201323DegTDnrJEryC1StrS aminotransferaseQuickGO ontologyBLASTP
8243178253631047FemAB-related protein PEP-CTERM system-associatedQuickGO ontologyBLASTP
825356826207852polysaccharide deactylase family protein PEP-CTERM locus subfamilyQuickGO ontologyBLASTP
8262628275841323PEP-CTERM system associated proteinQuickGO ontologyBLASTP
8276288288151188secretion ATPase PEP-CTERM locus subfamilyQuickGO ontologyBLASTP
828827829708882exopolysaccharidePEPCTERM locus tyrosine autokinaseQuickGO ontologyBLASTP
8297198311611443polysaccharide chain length determinant protein PEP-CTERM locus subfamilyQuickGO ontologyBLASTP
831222832028807polysaccharide export protein PEP-CTERM sytem-associatedQuickGO ontologyBLASTP
8320288333591332sugar transferase PEP-CTERM system associatedQuickGO ontologyBLASTP
8333718360222652PEP-CTERM system TPR-repeat lipoproteinQuickGO ontologyBLASTP
8373698402752907UBATHIF-type NADFAD binding proteinQuickGO ontologyBLASTP
840610841473864protein of unknown function DUF1555QuickGO ontologyBLASTP
841599842453855protein of unknown function DUF1555QuickGO ontologyBLASTP
842631843341711CAAX prenyl protease-related proteinQuickGO ontologyBLASTP
8433628444231062secretion protein HlyD family proteinQuickGO ontologyBLASTP
844420845118699ABC transporter relatedQuickGO ontologyBLASTP
8451188462481131protein of unknown function DUF214QuickGO ontologyBLASTP
8462938477621470putative two component sigma54 specific transcriptional regulator Fis familyQuickGO ontologyBLASTP