Pre_GI Gene

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Host: NC_015410 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015410:1144272 Pseudomonas mendocina NK-01 chromosome, complete genome

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocin is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
11433761144275900bifunctional riboflavin kinaseFMN adenylyltransferaseQuickGO ontologyBLASTP
114427211471062835isoleucyl-tRNA synthetaseQuickGO ontologyBLASTP
11470991147608510lipoprotein signal peptidaseQuickGO ontologyBLASTP
11476051148042438FKBP-type peptidylprolyl isomeraseQuickGO ontologyBLASTP
114817911491239454-hydroxy-3-methylbut-2-enyl diphosphate reductaseQuickGO ontologyBLASTP
11491761149637462Tfp pilus assembly protein PilE-like proteinQuickGO ontologyBLASTP
114963411529663333putative type IV fimbrial biogenesis protein PilY1QuickGO ontologyBLASTP
11536161154170555type 4 fimbrial biogenesis protein PilXQuickGO ontologyBLASTP
11541671154889723type 4 fimbrial biogenesis protein PilWQuickGO ontologyBLASTP
11548891155404516type IV pilus modification protein PilVQuickGO ontologyBLASTP
11554011155889489Tfp pilus assembly protein FimT-like proteinQuickGO ontologyBLASTP
11560051156430426Tfp pilus assembly protein FimT-like proteinQuickGO ontologyBLASTP
115663211576961065glycine oxidase ThiOQuickGO ontologyBLASTP
115771311590531341two-component response regulator PilRQuickGO ontologyBLASTP
115905611606481593sensor protein PilSQuickGO ontologyBLASTP
11606381160874237hypothetical proteinBLASTP
11610701162062993DNA uptake lipoprotein-like proteinQuickGO ontologyBLASTP
11621921163175984ribosomal large subunit pseudouridine synthase DQuickGO ontologyBLASTP
11631721163903732hypothetical proteinBLASTP
11640241164626603TetR family transcriptional regulatorQuickGO ontologyBLASTP