Pre_GI: BLASTN Hits

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Query: NC_015410:1144272 Pseudomonas mendocina NK-01 chromosome, complete genome

Start: 1144272, End: 1164626, Length: 20355

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocin is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009439:1075170*1075170109793122762Pseudomonas mendocina ymp, complete genome05412BLASTN svgBLASTP svg
NC_008463:5364428*5364428539303028603Pseudomonas aeruginosa UCBPP-PA14, complete genome01374BLASTN svgBLASTP svg
NC_015556:41183044118304414271224409Pseudomonas fulva 12-X chromosome, complete genome01302BLASTN svgBLASTP svg
NC_015740:926920*92692094828521366Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete01084BLASTN svgBLASTP svg
NC_009434:1068281*1068281109060022320Pseudomonas stutzeri A1501, complete genome01045BLASTN svgBLASTP svg
NC_008740:979830*979830100009920270Marinobacter aquaeolei VT8, complete genome6e-112412BLASTN svgBLASTP svg
NC_005773:866157*86615792659960443Pseudomonas syringae pv. phaseolicola 1448A, complete genome3e-98367BLASTN svgBLASTP svg
NC_014532:349384*34938437223122848Halomonas elongata DSM 2581, complete genome7e-96359BLASTN svgBLASTP svg
NC_007005:830467*83046785407423608Pseudomonas syringae pv. syringae B728a, complete genome4e-91343BLASTN svgBLASTP svg
NC_003919:3812778*3812778386982357046Xanthomonas axonopodis pv. citri str. 306, complete genome2e-46194BLASTN svgBLASTP svg
NC_011901:3363500*3363500338699623497Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete1e-45192BLASTN svgBLASTP svg
NC_007508:3835000*3835000385851223513Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome4e-45190BLASTN svgBLASTP svg
NC_015947:35394723539472355883219361Burkholderia sp. JV3 chromosome, complete genome3e-33151BLASTN svgBLASTP svg
NC_011071:35444503544450356909924650Stenotrophomonas maltophilia R551-3, complete genome8e-31143BLASTN svgBLASTP svg
NC_007086:1224867*1224867128273457868Xanthomonas campestris pv. campestris str. 8004, complete genome2e-28135BLASTN svgBLASTP svg
NC_003902:3666544*3666544374180275259Xanthomonas campestris pv. campestris str. ATCC 33913, complete2e-28135BLASTN svgBLASTP svg
NC_010688:1192410*1192410126259970190Xanthomonas campestris pv. campestris, complete genome3e-27131BLASTN svgBLASTP svg
NC_007298:3271071*3271071329537724307Dechloromonas aromatica RCB, complete genome1e-26129BLASTN svgBLASTP svg
NC_010943:1332243*1332243137790845666Stenotrophomonas maltophilia K279a, complete genome5e-23117BLASTN svgBLASTP svg
NC_011901:27399842739984276222422241Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete3e-21111BLASTN svgBLASTP svg
NC_008340:27722327722330180624584Alkalilimnicola ehrlichei MLHE-1, complete genome5e-20107BLASTN svgBLASTP svg
NC_019940:2432689*2432689245259919911Thioflavicoccus mobilis 8321 chromosome, complete genome5e-20107BLASTN svgBLASTP svg
NC_008702:1094663*1094663111848823826Azoarcus sp. BH72, complete genome7e-19103BLASTN svgBLASTP svg
NC_013850:4612812*4612812463649923688Klebsiella variicola At-22 chromosome, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_008700:1115436*1115436114339927964Shewanella amazonensis SB2B, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_007508:1446526*1446526147198625461Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_008260:497855*49785551915621302Alcanivorax borkumensis SK2, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_014394:2228470*2228470225229223823Gallionella capsiferriformans ES-2 chromosome, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_010995:3821327*3821327385020828882Cellvibrio japonicus Ueda107, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_015733:42539614253961427610922149Pseudomonas putida S16 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_013850:1198134*1198134121800019867Klebsiella variicola At-22 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
AP010958:12660*126603398921330Escherichia coli O103:H2 str. 12009 DNA, complete genome4e-1177.8BLASTN svgBLASTP svg
CP002185:11921*119213722925309Escherichia coli W, complete genome4e-1177.8BLASTN svgBLASTP svg
CP002516:4081484*4081484410409522612Escherichia coli KO11, complete genome4e-1177.8BLASTN svgBLASTP svg
CU928145:11394*113943596224569Escherichia coli 55989 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_007384:16500*165004120424705Shigella sonnei Ss046, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_009800:12162*121623729725136Escherichia coli HS, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_009801:11921*119213399422074Escherichia coli E24377A, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_011748:11394*113943596224569Escherichia coli 55989, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_014931:5088125*5088125512272134597Variovorax paradoxus EPS chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_008781:19738261973826199696823143Polaromonas naphthalenivorans CJ2, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_015422:1116359*1116359114310426746Alicycliphilus denitrificans K601 chromosome, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_007645:6049340*6049340607799328654Hahella chejuensis KCTC 2396, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_009648:3192483*3192483321423721755Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_011750:12047*120474221230166Escherichia coli IAI39 chromosome, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_011751:12000*120003835526356Escherichia coli UMN026 chromosome, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_015424:3890293*3890293391528924997Aeromonas veronii B565 chromosome, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_016002:1975000*1975000202494749948Pseudogulbenkiania sp. NH8B, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_007298:17214251721425174188220458Dechloromonas aromatica RCB, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_004347:3670145*3670145369364023496Shewanella oneidensis MR-1, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_002947:737924*73792476633928416Pseudomonas putida KT2440, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_003112:719490*71949074286423375Neisseria meningitidis MC58, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_003116:867943*86794389021922277Neisseria meningitidis Z2491, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007347:32046373204637323548530849Ralstonia eutropha JMP134 chromosome 1, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_009512:755658*75565878272327066Pseudomonas putida F1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010468:3970995*3970995399406323069Escherichia coli ATCC 8739, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015064:1722776*1722776174138218607Acidobacterium sp. MP5ACTX9 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015733:715947*71594774917233226Pseudomonas putida S16 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_016026:2082500*2082500211358331084Micavibrio aeruginosavorus ARL-13 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
CP002185:2889656*2889656291209922444Escherichia coli W, complete genome6e-0763.9BLASTN svgBLASTP svg
CP002516:1196000*1196000121818122182Escherichia coli KO11, complete genome6e-0763.9BLASTN svgBLASTP svg
CU928160:2785792*2785792280821622425Escherichia coli IAI1 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_002655:12000*120003357021571Escherichia coli O157:H7 EDL933, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_002695:12000*120003517323174Escherichia coli O157:H7 str. Sakai, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_008752:20565472056547207678720241Acidovorax avenae subsp. citrulli AAC00-1, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_003198:2703013*2703013272616623154Salmonella enterica subsp. enterica serovar Typhi str. CT18,2e-0661.9BLASTN svgBLASTP svg
NC_006905:2805877*2805877282870222826Salmonella enterica subsp. enterica serovar Choleraesuis str2e-0661.9BLASTN svgBLASTP svg
NC_011080:2789744*2789744281281123068Salmonella enterica subsp. enterica serovar Newport str. SL254,2e-0661.9BLASTN svgBLASTP svg
NC_011149:2701916*2701916272409922184Salmonella enterica subsp. enterica serovar Agona str. SL483,2e-0661.9BLASTN svgBLASTP svg
NC_011662:38616238616243991353752Thauera sp. MZ1T, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_013446:4281250*4281250430762526376Comamonas testosteroni CNB-2, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_015138:4205986*4205986423312827143Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete2e-0661.9BLASTN svgBLASTP svg
NC_007618:1593886*1593886161751623631Brucella melitensis biovar Abortus 2308 chromosome I, complete9e-0660BLASTN svgBLASTP svg
NC_007973:49960649960652396824363Ralstonia metallidurans CH34 chromosome 1, complete sequence9e-0660BLASTN svgBLASTP svg
NC_008595:11766581176658119686720210Mycobacterium avium 104, complete genome9e-0660BLASTN svgBLASTP svg
NC_010103:1577750*1577750160141623667Brucella canis ATCC 23365 chromosome I, complete sequence9e-0660BLASTN svgBLASTP svg
NC_010120:662969*66296968275319785Neisseria meningitidis 053442, complete genome9e-0660BLASTN svgBLASTP svg
NC_010505:4820000*4820000485884138842Methylobacterium radiotolerans JCM 2831, complete genome9e-0660BLASTN svgBLASTP svg
NC_010742:1595065*1595065161869323629Brucella abortus S19 chromosome 1, complete sequence9e-0660BLASTN svgBLASTP svg
NC_013521:29245402924540295147426935Sanguibacter keddieii DSM 10542, complete genome9e-0660BLASTN svgBLASTP svg
NC_015953:47469834746983477386726885Streptomyces sp. SirexAA-E chromosome, complete genome9e-0660BLASTN svgBLASTP svg
CU928160:11381*113813595024570Escherichia coli IAI1 chromosome, complete genome9e-0660BLASTN svgBLASTP svg