Pre_GI Gene

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Host: AP010958 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

AP010958:12660 Escherichia coli O103:H2 str. 12009 DNA, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
1266013064405conserved predicted proteinQuickGO ontologyBLASTP
13441153571917chaperone Hsp70QuickGO ontologyBLASTP
15446165761131chaperone Hsp40QuickGO ontologyBLASTP
1668016832153small toxic membrane peptide HokCQuickGO ontologyBLASTP
17418185841167sodium-proton antiporter NhaAQuickGO ontologyBLASTP
1864419549906DNA-binding transcriptional activator NhaRQuickGO ontologyBLASTP
22137235581422T3SS effector-like protein EspX-homologQuickGO ontologyBLASTP
240422430526430S ribosomal subunit protein S20QuickGO ontologyBLASTP
2440824626219conserved predicted proteinQuickGO ontologyBLASTP
2463425575942bifunctional riboflavin kinase and FAD synthetaseQuickGO ontologyBLASTP
25618284342817isoleucyl-tRNA synthetaseQuickGO ontologyBLASTP
2843428928495prolipoprotein signal peptidaseQuickGO ontologyBLASTP
2901629465450FKBP-type peptidyl-prolyl cis-trans isomeraseQuickGO ontologyBLASTP
29467304179511-hydroxy-2-methyl-2-E-butenyl 4-diphosphate reductase 4Fe-4S proteinQuickGO ontologyBLASTP
3048331397915ribonucleoside hydrolase 3QuickGO ontologyBLASTP
3156432385822dihydrodipicolinate reductaseQuickGO ontologyBLASTP
32841339891149carbamoyl phosphate synthetase small subunitQuickGO ontologyBLASTP