Pre_GI Gene

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Host: NC_004347 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_004347:3670145 Shewanella oneidensis MR-1, complete genome

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
367014536711611017transcriptional regulator LacI familyQuickGO ontologyBLASTP
367136136726501290NADH dehydrogenaseQuickGO ontologyBLASTP
367285936740611203ISSod4 transposaseQuickGO ontologyBLASTP
36741353674473339nitrogen regulatory protein P-II 1QuickGO ontologyBLASTP
36747193675231513type IV pilus biogenesis protein putativeQuickGO ontologyBLASTP
36755173676011495type IV pilus biogenesis protein putativeQuickGO ontologyBLASTP
367616736773691203ISSod4 transposaseQuickGO ontologyBLASTP
36774683677773306hypothetical proteinBLASTP
36777703678162393type IV pilus biogenesis protein PilEQuickGO ontologyBLASTP
367817336816793507type IV pilin biogenesis protein putativeQuickGO ontologyBLASTP
36816833682144462hypothetical proteinBLASTP
36821563683094939hypothetical proteinBLASTP
36831283683691564hypothetical proteinBLASTP
36839093684865957penicillin tolerance protein LytBQuickGO ontologyBLASTP
36848673685286420peptidyl-prolyl cis-trans isomerase FkbPQuickGO ontologyBLASTP
36852863685798513lipoprotein signal peptidaseQuickGO ontologyBLASTP
368580836886302823isoleucyl-tRNA synthetaseQuickGO ontologyBLASTP
36886633689598936riboflavin biosynthesis protein RibFQuickGO ontologyBLASTP
368966436912231560MviN proteinQuickGO ontologyBLASTP
36914763691742267ribosomal protein S20QuickGO ontologyBLASTP
36918033692099297transcriptional regulator HlyUQuickGO ontologyBLASTP
369239636936401245peptidase M28D familyQuickGO ontologyBLASTP