Pre_GI Gene

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Host: NC_011149 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011149:2701916 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
27019162702335420putative thioredoxinQuickGO ontologyBLASTP
27024082703088681DTW domain proteinQuickGO ontologyBLASTP
270314227058022661CoA binding domainacetyltransferase domain proteinQuickGO ontologyBLASTP
270591727072721356CDP-diacylglycerol--serine O-phosphatidyltransferaseQuickGO ontologyBLASTP
27073092707638330hypothetical proteinBLASTP
270763527089361302alpha-ketoglutarate permeaseQuickGO ontologyBLASTP
27090402709495456putative cytoplasmic proteinQuickGO ontologyBLASTP
27097432709862120hypothetical protein
270988227099971165S ribosomal RNAQuickGO ontologyBLASTP
27112442711363120hypothetical proteinBLASTP
27154332715549117hypothetical protein
271555127181242574ATP-dependent chaperone protein ClpBQuickGO ontologyBLASTP
27182542718985732conserved hypothetical protein TIGR00726QuickGO ontologyBLASTP
27189822719962981ribosomal large subunit pseudouridine synthase DQuickGO ontologyBLASTP
27200942720831738outer membrane assembly lipoprotein YfiOQuickGO ontologyBLASTP
27211032721441339ribosomal subunit interface proteinQuickGO ontologyBLASTP
27218122721985174hypothetical protein
272212127235931473hypothetical proteinBLASTP