Pre_GI Gene

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Host: CP002516 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

CP002516:1196000 Escherichia coli KO11, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
119602011971801161chorismate mutaseQuickGO ontologyBLASTP
11974301197771342sigma 54 modulation proteinribosomal protein S30EAQuickGO ontologyBLASTP
11980421198779738outer membrane assembly lipoprotein YfiOQuickGO ontologyBLASTP
11989141199894981pseudouridine synthase RluA familyQuickGO ontologyBLASTP
11998911200622732protein of unknown function DUF152QuickGO ontologyBLASTP
120075212033252574ATP-dependent chaperone ClpBQuickGO ontologyBLASTP
12037761205305153016S ribosomal RNAQuickGO ontologyBLASTP
1205482120555776tRNA-GluQuickGO ontology
12057531208653290123S ribosomal RNAQuickGO ontologyBLASTP
120874812088631165S ribosomal RNAQuickGO ontologyBLASTP
120918912104871299metaboliteH symporter major facilitator superfamily MFSQuickGO ontologyBLASTP
12104841210807324hypothetical proteinBLASTP
121085312122081356phospholipase DTransphosphatidylaseQuickGO ontologyBLASTP
121232212149822661GCN5-related N-acetyltransferaseQuickGO ontologyBLASTP
12150141215712699DTW domain containing proteinQuickGO ontologyBLASTP
12157811216200420thioredoxinQuickGO ontologyBLASTP
121640712174441038tRNArRNA methyltransferase SpoUQuickGO ontologyBLASTP
12174921218181690uracil-DNA glycosylaseQuickGO ontologyBLASTP