Pre_GI Gene

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Host: NC_002655 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_002655:12000 Escherichia coli O157:H7 EDL933, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (substrain) is considered a reference strain of O157:H7, which was first isolated during an outbreak in 1982. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora.E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
12180140961917molecular chaperone DnaKQuickGO ontologyBLASTP
14185153151131chaperone with DnaK heat shock proteinQuickGO ontologyBLASTP
1541915628210Gef protein interferes with membrane function when in excessQuickGO ontologyBLASTP
16157173231167NaH antiporter pH dependentQuickGO ontologyBLASTP
1738318288906transcriptional activator of nhaAQuickGO ontologyBLASTP
1832618949624hypothetical proteinBLASTP
1896019286327hypothetical proteinBLASTP
19299217492451putative usher proteinQuickGO ontologyBLASTP
2176222445684putative chaperone proteinQuickGO ontologyBLASTP
2249523028534putative type-1 fimbrial proteinQuickGO ontologyBLASTP
23330247511422hypothetical proteinBLASTP
252212548426430S ribosomal protein S20QuickGO ontologyBLASTP
2558725811225hypothetical proteinBLASTP
2581926760942hypothetical proteinBLASTP
26803296192817isoleucyl-tRNA synthetaseQuickGO ontologyBLASTP
2961930113495signal peptidase IIQuickGO ontologyBLASTP
3020130650450probable FKBX-type 16KD peptidyl-prolyl cis-trans isomerase a rotamaseQuickGO ontologyBLASTP
30652316029514-hydroxy-3-methylbut-2-enyl diphosphate reductaseQuickGO ontologyBLASTP
3166832582915hypothetical proteinBLASTP
3274933570822dihydrodipicolinate reductaseQuickGO ontologyBLASTP