Pre_GI Gene

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Host: NC_011748 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011748:11394 Escherichia coli 55989, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from the diarrheagenic stools of an HIV-positive adult suffering from persistent watery diarrhea in Central African Republic. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
1139411798405hypothetical proteinBLASTP
12175140911917molecular chaperone DnaKQuickGO ontologyBLASTP
140921418089tpke11QuickGO ontologyBLASTP
14180153101131chaperone protein DnaJQuickGO ontologyBLASTP
156151566955SokCQuickGO ontology
16152173181167pH-dependent sodiumproton antiporterQuickGO ontologyBLASTP
1737818283906transcriptional activator NhaRQuickGO ontologyBLASTP
1832219281960hypothetical proteinBLASTP
227762303926430S ribosomal protein S20QuickGO ontologyBLASTP
2314223360219hypothetical proteinBLASTP
2336824309942bifunctional riboflavin kinaseFMN adenylyltransferaseQuickGO ontologyBLASTP
24352271682817isoleucyl-tRNA synthetaseQuickGO ontologyBLASTP
2716827662495lipoprotein signal peptidaseQuickGO ontologyBLASTP
2775028199450FKBP-type peptidyl-prolyl cis-trans isomerase rotamaseQuickGO ontologyBLASTP
28201291519514-hydroxy-3-methylbut-2-enyl diphosphate reductaseQuickGO ontologyBLASTP
2921730131915ribonucleoside hydrolase RihCQuickGO ontologyBLASTP
3029831119822dihydrodipicolinate reductaseQuickGO ontologyBLASTP
31575327231149carbamoyl phosphate synthase small subunitQuickGO ontologyBLASTP
32741359623222carbamoyl phosphate synthase large subunitQuickGO ontologyBLASTP