Pre_GI Gene

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Host: NC_009512 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009512:755658 Pseudomonas putida F1, complete genome

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
755658756089432hypothetical proteinBLASTP
756095756883789membrane protein-like proteinQuickGO ontologyBLASTP
757068757268201protein of unknown function DUF329QuickGO ontologyBLASTP
757265757888624dephospho-CoA kinaseQuickGO ontologyBLASTP
757888758754867Prepilin peptidaseQuickGO ontologyBLASTP
7587577599651209type II secretion system proteinQuickGO ontologyBLASTP
760182760592411Fimbrial protein pilinQuickGO ontologyBLASTP
76066476073976tRNA-ThrQuickGO ontologyBLASTP
7609617621451185filamentation induced by cAMP protein FicQuickGO ontologyBLASTP
764563765465903hypothetical proteinBLASTP
765462766094633hypothetical protein
766285767151867hypothetical proteinBLASTP
768040768822783hypothetical proteinBLASTP
770447770674228hypothetical proteinBLASTP
7707397721241386gluconate transporterQuickGO ontologyBLASTP
772125772403279hypothetical proteinBLASTP
772558773487930Lactatemalate dehydrogenaseQuickGO ontologyBLASTP
773862774221360hypothetical protein
774283775104822polar amino acid ABC transporter inner membrane subunitQuickGO ontologyBLASTP
775101775922822extracellular solute-binding protein family 3QuickGO ontologyBLASTP
775990776925936homocysteine S-methyltransferaseQuickGO ontologyBLASTP
7770937783641272Cystathionine gamma-synthaseQuickGO ontologyBLASTP
7785077799461440amino acid permease-associated regionQuickGO ontologyBLASTP
779992780876885transcriptional regulator LysR familyQuickGO ontologyBLASTP
7809017822891389Threonine synthaseQuickGO ontologyBLASTP
782286782723438putative transcriptional regulator AsnC familyQuickGO ontologyBLASTP