Pre_GI Gene

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Host: NC_006905 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006905:2805877 Salmonella enterica subsp. enterica serovar Choleraesuis str

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
28058772806296420thioredoxin 2 redox factorQuickGO ontologyBLASTP
28063692807049681putative cytoplasmic proteinQuickGO ontologyBLASTP
280710328097632661putative acetyl-CoA synthetaseQuickGO ontologyBLASTP
280987528112331359phosphatidylserine synthaseQuickGO ontologyBLASTP
28112782811601324putative outer membrane lipoproteinQuickGO ontologyBLASTP
281159828128991302MFS family alpha-ketoglutarate permeaseQuickGO ontologyBLASTP
28130032813458456putative cytoplasmic proteinQuickGO ontologyBLASTP
281935328219262574ATP-dependent protease Hsp 100 part of novel multi-chaperone system with DnaK DnaJ and GrpEQuickGO ontologyBLASTP
28220562822787732putative inner membrane proteinQuickGO ontologyBLASTP
28227842823764981pseudouridine synthase pseudouridines 1911 1915 1917 in 23S RNAQuickGO ontologyBLASTP
28238962824633738putative lipoproteinQuickGO ontologyBLASTP
28246082824763156hypothetical protein
28249052825243339ribosome associated factor stabilizes ribosomes against dissociationQuickGO ontologyBLASTP
282549428266541161bifuctional chorismate mutase P prephenate dehydrataseQuickGO ontologyBLASTP
28266152827523909putative cytoplasmic proteinQuickGO ontologyBLASTP
282758128287021122chorismate mutase Tprephenate dehydrogenaseQuickGO ontologyBLASTP