Pre_GI Gene

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Host: NC_007005 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007005:830467 Pseudomonas syringae pv. syringae B728a, complete genome

Host Lineage: Pseudomonas syringae; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is the causal agent of brown spot disease on beans. It was isolated from a snap bean leaflet in Wisconsin, USA. Plant pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
830467831429963Pseudouridine synthase RluDQuickGO ontologyBLASTP
831426832154729Protein of unknown function DUF152QuickGO ontologyBLASTP
8323268348902565AAA ATPase central regionClp N terminalClp N terminalQuickGO ontologyBLASTP
83518583526076tRNA-AsnQuickGO ontologyBLASTP
83529083536677tRNA-ProQuickGO ontologyBLASTP
83537283544776tRNA-LysQuickGO ontologyBLASTP
83554383561977tRNA-ProQuickGO ontologyBLASTP
838293839249957RelaxaseQuickGO ontologyBLASTP
839680840123444Protein of unknown function DUF159QuickGO ontologyBLASTP
840487840921435Peptidase S24 S26A and S26BQuickGO ontologyBLASTP
840908841153246umuC proteinQuickGO ontologyBLASTP
841367841780414putative transmembrane proteinQuickGO ontologyBLASTP
842575843261687type III effector protein AvrRpm1QuickGO ontology
845008845643636regulatory protein TetRQuickGO ontologyBLASTP
845696846529834Enoyl-CoA hydrataseisomeraseQuickGO ontologyBLASTP
848631848996366IS66 Orf2 likeQuickGO ontologyBLASTP
8495498509911443Major facilitator superfamilyQuickGO ontologyBLASTP
8517458532831539AMP-dependent synthetase and ligaseQuickGO ontologyBLASTP
853283854074792hypothetical proteinBLASTP