Pre_GI: BLASTP Hits

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Query: NC_015410:1144272:1164024 Pseudomonas mendocina NK-01 chromosome, complete genome

Start: 1164024, End: 1164626, Length: 603

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocin is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009439:1075170:109619310961931096795603Pseudomonas mendocina ymp, complete genomeTetR family transcriptional regulator4e-108390
NC_015572:1974000:198222719822271982814588Methylomonas methanica MC09 chromosome, complete genomeTetR family transcriptional regulator3e-22105
NC_016112:364723:377077377077377793717Methylomicrobium alcaliphilum chromosome, complete genometranscriptional regulator, TetR family3e-22104
NC_002939:805794:826391826391826981591Geobacter sulfurreducens PCA, complete genometranscriptional regulator, TetR family2e-21102
NC_015856:3059737:308118730811873081783597Collimonas fungivorans Ter331 chromosome, complete genomeTetR family transcriptional regulator2e-2098.6
NC_015675:6228000:622956562295656230176612Mesorhizobium opportunistum WSM2075 chromosome, complete genomeTetR family transcriptional regulator9e-2096.7
NC_010002:4256651:428231342823134282894582Delftia acidovorans SPH-1, complete genometranscriptional regulator, TetR family3e-1995.1
NC_010814:3673983:369544636954463696018573Geobacter lovleyi SZ, complete genometranscriptional regulator, TetR family3e-1995.1
NC_014118:1528851:153288315328831533437555Burkholderia sp. CCGE1002 chromosome chromosome 2, completetranscriptional regulator, TetR family5e-1994
NC_013422:1732677:174532717453271745968642Halothiobacillus neapolitanus c2, complete genometranscriptional regulator, TetR family2e-1892.4
NC_007493:1:138391383914498660Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequenceregulatory protein TetR family4e-1891.3
NC_009659:1129066:114427111442711144846576Janthinobacterium sp. Marseille chromosome, complete genomeTetR family transcriptional regulator9e-1890.1
NC_012108:904260:918404918404919174771Desulfobacterium autotrophicum HRM2, complete genometranscriptional regulator (TetR family protein)9e-1890.1
NC_009049:80184:951149511495773660Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequencetranscriptional regulator, TetR family1e-1789.4
NC_002947:2809591:282171928217192822312594Pseudomonas putida KT2440, complete genometranscriptional regulator, TetR family4e-1787.8
NC_006512:728281:746456746456747082627Idiomarina loihiensis L2TR, complete genomeTranscriptional regulator, TetR family3e-1685.1
NC_021150:1823874:182683718268371827376540Azotobacter vinelandii CA6, complete genometranscriptional regulator, TetR family2e-1582.4
NC_012560:1823861:182682418268241827363540Azotobacter vinelandii DJ, complete genometranscriptional regulator, TetR family2e-1582.4
CP002797:4603787:463663246366324637288657Escherichia coli NA114, complete genomePutative transcriptional regulator, TetR family4e-1581.3
NC_017033:1939507:195994219599421960556615Frateuria aurantia DSM 6220 chromosome, complete genometranscriptional regulator3e-1478.2
NC_013850:1753716:178398017839801784687708Klebsiella variicola At-22 chromosome, complete genometranscriptional regulator, TetR family1e-1273.2
NC_014306:3102000:311072331107233111337615Erwinia billingiae Eb661, complete genomeTranscriptional regulator, TetR family3e-1065.1
NC_008596:3404832:343634934363493436951603Mycobacterium smegmatis str. MC2 155, complete genomeregulatory protein, TetR3e-1065.1
NC_014915:3320768:336686733668673367790924Geobacillus sp. Y412MC52 chromosome, complete genomeregulatory protein TetR3e-0961.6
UCMB5137:2054735:209490420949042095476573Bacillus atrophaeus UCMB-5137transcriptional regulator5e-0857.8
NC_014623:9492000:949227594922759492889615Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeTetR family transcriptional regulator6e-0857.4
NC_021177:2241647:224302222430222243660639Streptomyces fulvissimus DSM 40593, complete genomeTetR family transcriptional regulator8e-0857
NC_010002:4326509:432650943265094327135627Delftia acidovorans SPH-1, complete genometranscriptional regulator, TetR family1e-0756.2
NC_007974:934000:935555935555936148594Ralstonia metallidurans CH34 chromosome 2, complete sequencetranscriptional regulator, TetR family2e-0755.8
NC_015563:3203012:325163832516383252264627Delftia sp. Cs1-4 chromosome, complete genomeregulatory protein TetR2e-0755.8
NC_015578:3266855:327350432735043274073570Treponema primitia ZAS-2 chromosome, complete genomeThlR, HTH transcriptional regulator TetR/AcrR family7e-0753.9
NC_015565:431273:436029436029436604576Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeTetR family transcriptional regulator9e-0753.5
NC_008278:925231:933885933885934556672Frankia alni ACN14a, complete genometranscriptional regulatory protein; TetR family9e-0753.5
NC_017328:1075535:109508510950851095303219Shigella flexneri 2002017 chromosome, complete genomeTetR family transcriptional regulator8e-0753.5
NC_015458:2441435:244083024408302441438609Pusillimonas sp. T7-7 chromosome, complete genometranscriptional regulator8e-0753.5
NC_015690:3477573:348976134897613490366606Paenibacillus mucilaginosus KNP414 chromosome, complete genomeTetR family transcriptional regulator8e-0753.5
NC_014831:1557485:157324815732481573841594Thermaerobacter marianensis DSM 12885 chromosome, complete genomeregulatory protein TetR1e-0652.8
UCMB5137:1:265826583233576Bacillus atrophaeus UCMB-5137hypothetical protein1e-0652.8
NC_009142:5519208:552635655263565526955600Saccharopolyspora erythraea NRRL 2338, complete genomeTetR-family transcriptional regulator2e-0652.4
NC_016935:4038265:404800040480004048605606Paenibacillus mucilaginosus 3016 chromosome, complete genomeTetR family transcriptional regulator2e-0652.4
NC_019897:73957:109118109118109699582Thermobacillus composti KWC4 chromosome, complete genometranscriptional regulator3e-0652
NC_018868:2935580:295135029513502951889540Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genometranscriptional regulator2e-0652
NC_007794:1504449:151167815116781512337660Novosphingobium aromaticivorans DSM 12444, complete genometranscriptional regulator, TetR family3e-0651.6
NC_002944:1781905:178551117855111786188678Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein3e-0651.6
NC_011983:1746000:174603617460361746614579Agrobacterium radiobacter K84 chromosome 2, complete genometranscriptional regulator protein4e-0651.2
NC_002927:1292573:129502512950251295645621Bordetella bronchiseptica RB50, complete genomeputative TetR-family transcriptional regulator5e-0651.2
NC_020063:2077233:208847920884792089114636Enterobacteriaceae bacterium strain FGI 57, complete genometranscriptional regulator7e-0650.4