Pre_GI Gene

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Host: NC_012792 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012792:962292 Variovorax paradoxus S110 chromosome 2, complete genome

Host Lineage: Variovorax paradoxus; Variovorax; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Soil. Variovorax paradoxus S110 is able to grow autotrophically using hydrogen gas and carbon dioxide for energy and carbon. Variovorax paradoxus is a nutritionally diverse organism which is commonly isolated from soil. Strains of this organism are able to degrade a number of compounds such as explosives and pesticides. Variovorax paradoxus is also a plant-growth promoting organism, increasing the resistance of the plant to disease and heavy metals.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
9622929661193828PBS lyase HEAT domain protein repeat-containing proteinQuickGO ontologyBLASTP
9662149682832070zinc finger SWIM domain proteinQuickGO ontologyBLASTP
9682839694101128VWA containing CoxE family proteinQuickGO ontologyBLASTP
969737969871135hypothetical protein
970018970740723hypothetical protein
971437972060624integrase family proteinQuickGO ontologyBLASTP
972553973026474hypothetical proteinBLASTP
973877974299423hypothetical protein
974712975140429hypothetical protein
976422976736315hypothetical proteinBLASTP
977515978192678Isoprenylcysteine carboxyl methyltransferaseQuickGO ontologyBLASTP
9784659802581794PQQ-dependent dehydrogenase methanolethanol familyQuickGO ontologyBLASTP
980269980613345High potential iron-sulfur proteinQuickGO ontologyBLASTP
980626980817192ApbE family lipoproteinQuickGO ontology
980839981633795ApbE family lipoproteinQuickGO ontologyBLASTP
9816309837382109nitrous oxide expression regulator NosRQuickGO ontologyBLASTP
983735984667933coenzyme PQQ biosynthesis protein BQuickGO ontologyBLASTP
9848279869532127GAF modulated sigma54 specific transcriptional regulator Fis familyQuickGO ontologyBLASTP
987234987728495cytochrome c550QuickGO ontologyBLASTP
987739988596858extracellular solute-binding protein family 3QuickGO ontology
9886899906831995acetateCoA ligaseQuickGO ontologyBLASTP