Pre_GI Gene

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Host: NC_010473 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010473:3069529 Escherichia coli str. K-12 substr. DH10B, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
306952930707911263diaminopimelate decarboxylase PLP-bindingQuickGO ontologyBLASTP
30709133071848936DNA-binding transcriptional dual regulatorQuickGO ontologyBLASTP
30718353072527693predicted racemaseQuickGO ontologyBLASTP
307265630740741419arabinose transporterQuickGO ontologyBLASTP
307438930751507622-deoxy-D-gluconate 3-dehydrogenaseQuickGO ontologyBLASTP
30751803076016837predicted 5-keto 4-deoxyuronate isomeraseQuickGO ontologyBLASTP
307630330774841182predicted acyltransferaseQuickGO ontologyBLASTP
307773930789681230predicted transporterQuickGO ontologyBLASTP
30794283080060633conserved protein with bipartite regulator domainQuickGO ontologyBLASTP
30803943081203810predicted transcriptional regulatorQuickGO ontologyBLASTP
30811963081678483hypothetical proteinBLASTP
30818273082252426hypothetical proteinBLASTP
30824463082892447hypothetical proteinBLASTP
30831603083651492predicted chaperoneQuickGO ontologyBLASTP
308398630853621377predictedtranscriptional regulatorQuickGO ontologyBLASTP
30855303085748219hypothetical proteinBLASTP
30859333086307375BLASTP
30863523086795444predicted DNA-binding transcriptional regulatorQuickGO ontologyBLASTP
30868293086984156hypothetical proteinBLASTP
30872063087637432hypothetical proteinBLASTP
30878543088279426hypothetical proteinBLASTP
30882643089169906IS2 insertion element transposase InsABQuickGO ontologyBLASTP
30891273089537411IS2 insertion element repressor InsAQuickGO ontologyBLASTP
308958430907201137BLASTP
3090876309094974tRNA-GlyQuickGO ontologyBLASTP
30910283091783756Tetratricopeptide repeat transcriptional regulatorQuickGO ontologyBLASTP
309223730944952259xanthine dehydrogenase molybdenum binding subunitQuickGO ontologyBLASTP
30945063095384879xanthine dehydrogenase FAD-binding subunitQuickGO ontologyBLASTP
30953813095860480xanthine dehydrogenase Fe-S binding subunitQuickGO ontologyBLASTP
309590030976781779predicted DNA-binding transcriptional regulatorQuickGO ontologyBLASTP
309815430993441191hypothetical proteinBLASTP
30994023100598119723-diaminopropionate ammonia-lyaseQuickGO ontologyBLASTP