Pre_GI Gene

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Host: NC_013315 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013315:1230214 Clostridium difficile CD196 chromosome, complete genome

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from a single patient with pseudomembranous colitis in a Paris hospital in 1985. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
123021412316051392FADFMN-containing dehydrogenaseQuickGO ontologyBLASTP
123186812331481281hypothetical proteinBLASTP
123361112348071197acetate kinaseQuickGO ontologyBLASTP
12349001235424525hypothetical proteinBLASTP
1235449123562517750S ribosomal protein L32QuickGO ontologyBLASTP
12358321236389558fatty acid biosynthesis transcriptional regulatorQuickGO ontologyBLASTP
123640012374221023glycerol-3-phosphate acyltransferase PlsXQuickGO ontologyBLASTP
123744812384349873-oxoacyl-ACP synthase IIIQuickGO ontologyBLASTP
12385431239472930trans-2-enoyl-ACP reductaseQuickGO ontologyBLASTP
124043712411867503-oxoacyl-ACP reductaseQuickGO ontologyBLASTP
12412401241464225acyl carrier proteinQuickGO ontologyBLASTP
1241493124273112393-oxoacyl-ACP synthase IIQuickGO ontologyBLASTP
124295712446751719signaling proteinQuickGO ontologyBLASTP
124470612467062001sigma-54 dependent transcriptional regulatorQuickGO ontologyBLASTP
12470511247299249hypothetical proteinBLASTP
12473341248059726glutamine amidotransferaseQuickGO ontologyBLASTP
124808112493941314amino acid permeaseQuickGO ontologyBLASTP
12496931250139447acetyltransferaseQuickGO ontologyBLASTP
125022812522131986fructose-16-bisphosphataseQuickGO ontologyBLASTP