Pre_GI Gene

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Host: NC_012125 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012125:3905782 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
390578239085802799NtrC family transcriptional regulators ATPase domain proteinQuickGO ontologyBLASTP
39087773909070294hypothetical proteinBLASTP
390917639105581383glycosyl hydrolaseQuickGO ontologyBLASTP
391061839118111194ribonucleoside transporterQuickGO ontologyBLASTP
39119823912386405cytoplasmic proteinQuickGO ontologyBLASTP
39123703912693324DNA-binding proteinQuickGO ontologyBLASTP
39128783913657780hypothetical proteinBLASTP
39136853913900216hypothetical proteinBLASTP
39140083914277270PTS system phosphocarrier proteinQuickGO ontologyBLASTP
39142873915147861fructose-16-bisphosphate aldolaseQuickGO ontologyBLASTP
391521039166161407carbohydrate kinaseQuickGO ontologyBLASTP
391668739180451359PTS system IIC componentQuickGO ontologyBLASTP
39181213918354234periplasmic proteinQuickGO ontologyBLASTP
39184053918878474phosphotransferase system mannitolfructose-specific IIA domain proteinQuickGO ontologyBLASTP
39199933920460468hypothetical proteinBLASTP
392063839220291392sugar phosphate antiporterQuickGO ontologyBLASTP
392217239235001329regulatory protein UhpCQuickGO ontologyBLASTP
392351039250121503sensory histidine kinase UhpBQuickGO ontologyBLASTP
39250123925665654DNA-binding transcriptional activator UhpAQuickGO ontologyBLASTP
392567739266901014hypothetical proteinBLASTP
392670239280181317permeaseQuickGO ontologyBLASTP
39280493928969921carbohydrate kinaseQuickGO ontologyBLASTP