Pre_GI Gene

Some Help

Host: CU928145 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

CU928145:3196173 Escherichia coli 55989 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
31961733197108936DNA-binding transcriptional dual regulatorQuickGO ontologyBLASTP
31970953197787693putative racemaseQuickGO ontologyBLASTP
319791631993341419arabinose transporterQuickGO ontologyBLASTP
319964932004107622-deoxy-D-gluconate 3-dehydrogenaseQuickGO ontologyBLASTP
320044032012768375-keto 4-deoxyuronate isomeraseQuickGO ontologyBLASTP
320156332027441182Acetyl-CoA acetyltransferaseQuickGO ontologyBLASTP
320299932042281230putative transporterQuickGO ontologyBLASTP
32046883205320633conserved hypothetical protein putative bipartite regulator domainQuickGO ontologyBLASTP
32056543206463810putative transcriptional regulatorQuickGO ontologyBLASTP
32064563206938483conserved hypothetical proteinBLASTP
32070873207512426conserved hypothetical proteinBLASTP
32077063208143438conserved hypothetical proteinBLASTP
32084213208912492putative chaperoneQuickGO ontologyBLASTP
320924732106231377putative transcriptional regulatorQuickGO ontologyBLASTP
32107913211009219conserved hypothetical proteinBLASTP
32110923211568477putative peptidoglycan-binding-like protein precursorQuickGO ontologyBLASTP
32116133212059447fragment of conserved hypothetical protein putative Bacterial regulatory protein LuxR family part 2QuickGO ontologyBLASTP
32120903212245156fragment of conserved hypothetical protein putative Bacterial regulatory protein LuxR family part 1QuickGO ontologyBLASTP
32124663212897432conserved hypothetical proteinBLASTP
32131143213695582conserved hypothetical proteinBLASTP
32137113214445735Putative Type III secretion system lipoprotein EprKQuickGO ontologyBLASTP
32144863214701216fragment of conserved hypothetical protein putative type III secretion apparatus protein partialQuickGO ontologyBLASTP
32148783215033156Putative Type III secretion EprI proteinQuickGO ontologyBLASTP
321504732162371191Putative Type III secretion EprH proteinQuickGO ontologyBLASTP
32164863216986501conserved hypothetical protein putative response regulator containing a CheY-like receiver domain and an HTH DNA-binding domainQuickGO ontologyBLASTP
32169883217281294conserved hypothetical proteinBLASTP
32173433217735393fragment of Surface presentation of antigens protein part 3QuickGO ontologyBLASTP
32177323217935204fragment of Surface presentation of antigens protein part 2QuickGO ontologyBLASTP
32180083218499492fragment of Surface presentation of antigens protein part 1QuickGO ontologyBLASTP
32185083219275768putative Type III secretion protein EpaRQuickGO ontologyBLASTP
32192773219537261fragment of surface presentation of antigens protein partialQuickGO ontologyBLASTP
32195473220212666putative type III secretion system protein EpaPQuickGO ontologyBLASTP
32201273220774648fragment of Type III secretion apparatus protein part 2QuickGO ontologyBLASTP
32207843221149366fragment of Type III secretion apparatus protein part 1QuickGO ontologyBLASTP
322128132229331653conserved hypothetical proteinBLASTP
3223125322319874tRNA-GlyQuickGO ontologyBLASTP
32232773224032756Tetratricopeptide repeat transcriptional regulatorQuickGO ontologyBLASTP
322448632267442259xanthine dehydrogenase molybdenum binding subunitQuickGO ontologyBLASTP
32267553227633879xanthine dehydrogenase FAD-binding subunitQuickGO ontologyBLASTP
32276303228109480xanthine dehydrogenase Fe-S binding subunitQuickGO ontologyBLASTP
322814932299271779putative DNA-binding transcriptional regulatorQuickGO ontologyBLASTP
323040332315931191conserved hypothetical proteinBLASTP
32316513232847119723-diaminopropionate ammonia-lyaseQuickGO ontologyBLASTP