Pre_GI Gene

Some Help

Host: NC_012483 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012483:483425 Acidobacterium capsulatum ATCC 51196, complete genome

Host Lineage: Acidobacterium capsulatum; Acidobacterium; Acidobacteriaceae; Acidobacteriales; Acidobacteria; Bacteria

General Information: Isolated from acidic mine drainage in Yanahara mine, Okayama, Japan. Acidophilic bacterium. This genus comprises a number of species commonly found in water reservoirs, microbial mats, many different soil types, marine and freshwater sediments, as well as in hot-spring mats and sediments, etc. Furthermore, they sometimes form the dominant group in a habitat. These bacteria are involved in the first step of destruction of biologically complex molecules produced by autotrophic (capable of synthesizing their own nutrients) microorganisms. Acidobacterium capsulatum is an aerobic, mesophilic, chemo-organotroph able to use a variety of carbon sources and to grow up to pH 6.0. The species comprises several strains characterized by orange pigmentation, production of menoquinones as their sole quinones, and branched-chain iso fatty acids as their cell envelope components.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
4834254867993375hypothetical proteinBLASTP
486774486902129hypothetical protein
486823487095273hypothetical protein
487164487703540peroxidase family proteinQuickGO ontologyBLASTP
487714488286573peroxidase family proteinQuickGO ontologyBLASTP
488989489636648hypothetical proteinBLASTP
489669490535867oxidoreductase short chain dehydrogenasereductase familyQuickGO ontologyBLASTP
490641491255615nitroreductase family proteinQuickGO ontologyBLASTP
491347492339993oxidoreductase zinc-binding dehydrogenase familyQuickGO ontologyBLASTP
492469493350882hydrolase alphabeta fold familyQuickGO ontologyBLASTP
493426494148723oxidoreductase short chain dehydrogenasereductase familyQuickGO ontologyBLASTP
4945994956991101oxidoreductase 2-nitropropane dioxygenase familyQuickGO ontologyBLASTP
4969904998002811sensory box sensor histidine kinaseQuickGO ontologyBLASTP
499974500417444two component response regulatorQuickGO ontologyBLASTP
500474501130657DNA-binding response regulator FixJQuickGO ontologyBLASTP
5011915022401050IS3 family transposase orfBQuickGO ontologyBLASTP
502240502584345IS3 family transposase orfAQuickGO ontologyBLASTP
502942503652711hydrolase haloacid dehalogenase familyQuickGO ontologyBLASTP
50379150387787tRNA-LeuQuickGO ontology
503939504229291preprotein translocase SecG subunitQuickGO ontology
5043655059631599GGDEF domain proteinQuickGO ontologyBLASTP
505968506570603cytochrome c oxidase subunit III homologQuickGO ontologyBLASTP
507060507674615glutamine amidotransferase SNO familyQuickGO ontologyBLASTP
507806508762957pyridoxine biosynthesis proteinQuickGO ontologyBLASTP
5090275107451719chloride transporter ClC familyQuickGO ontologyBLASTP
510749511324576thioesterase family proteinQuickGO ontologyBLASTP
5114635125661104GGDEF domain proteinQuickGO ontologyBLASTP
5125945139401347tRNA-i6A37 thiotransferase enzyme MiaBQuickGO ontologyBLASTP
513982514470489hypothetical proteinBLASTP
5145685160881521flippase domain proteinQuickGO ontology
5161165172881173glycosyl transferase group 1 familyQuickGO ontologyBLASTP
5174345184741041cytochrome d ubiquinol oxidase subunit IIQuickGO ontologyBLASTP
5185065198581353cytochrome d ubiquinol oxidase subunit IQuickGO ontologyBLASTP
519993520598606hypothetical protein
520592521485894universal stress protein family proteinQuickGO ontologyBLASTP
521860522813954universal stress family proteinQuickGO ontologyBLASTP
522876523478603hypothetical protein
523206523511306hypothetical protein
523534524220687transcriptional regulator CrpFnr familyQuickGO ontologyBLASTP
5242655266102346sigma-54 dependent transcriptional regulator Fis familyQuickGO ontologyBLASTP
5266385280771440cytochrome c domain proteinQuickGO ontologyBLASTP
528093528413321cytochrome c family proteinQuickGO ontologyBLASTP
5284455308532409hypothetical protein
531139532068930cytochrome c family proteinQuickGO ontologyBLASTP