Pre_GI Gene

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Host: NC_006511 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006511:529424 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
5294245308151392phosphoglycerate transporter proteinQuickGO ontologyBLASTP
5312515324441194phosphoglycerate transport regulatory protein PgtC precursorQuickGO ontologyBLASTP
5344385356851248phosphoglycerate transport system transcriptional regulatory protein PgtAQuickGO ontologyBLASTP
535953536891939outer membrane protease EQuickGO ontologyBLASTP
5383725402941923putative lipopolysaccharide modification acyltransferaseQuickGO ontologyBLASTP
540311540565255bactoprenol glucosyl transferaseQuickGO ontologyBLASTP
540534540923390bactoprenol-linked glucose transferaseQuickGO ontologyBLASTP
54201954209072tRNA-ArgQuickGO ontology
542166543107942hypothetical proteinBLASTP
543396544151756VacJ lipoprotein precursorQuickGO ontologyBLASTP
5442125455251314long-chain fatty acid transport protein precursorQuickGO ontologyBLASTP
545890546174285hypothetical proteinBLASTP
5463515476611311acetyl-CoA acetyltransferaseQuickGO ontologyBLASTP
5476615498082148putative fatty acid oxidation complex alpha subunitQuickGO ontologyBLASTP
550017550502486phosphohistidine phosphataseQuickGO ontologyBLASTP
550602551153552hypothetical proteinBLASTP
551319552251933hypothetical proteinBLASTP