Pre_GI Gene

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Host: CP002185 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

CP002185:3167738 Escherichia coli W, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
316773831690001263diaminopimelate decarboxylase PLP-binding proteinQuickGO ontologyBLASTP
31691223170057936DNA-binding transcriptional dual regulatorQuickGO ontologyBLASTP
31700443170736693predicted racemaseQuickGO ontologyBLASTP
317086531722831419arabinose transporterQuickGO ontologyBLASTP
317259831733597622-deoxy-D-gluconate 3-dehydrogenaseQuickGO ontologyBLASTP
31733893174225837predicted 5-keto 4-deoxyuronate isomeraseQuickGO ontologyBLASTP
317451231756931182predicted acyltransferaseQuickGO ontologyBLASTP
317594831771771230predicted transporterQuickGO ontologyBLASTP
31776373178269633conserved protein with bipartite regulator domainQuickGO ontologyBLASTP
31783513178482132conserved hypothetical proteinBLASTP
31786033179412810predicted transcriptional regulatorQuickGO ontologyBLASTP
31794013179886486BLASTP
3179919317999981small stress response proteinQuickGO ontologyBLASTP
31800353180460426conserved hypothetical proteinBLASTP
31806543181091438BLASTP
31813693181860492type III secretion-associated chaperoneQuickGO ontologyBLASTP
318219531835711377putative invasion genes regulatorQuickGO ontologyBLASTP
31837383183956219conserved hypothetical proteinBLASTP
31841413184515375putative lytic transglycosylaseQuickGO ontologyBLASTP
31845603185192633BLASTP
31854133185844432BLASTP
31860613186641581BLASTP
31866573187391735BLASTP
31874323187719288truncated type III secretion apparatus proteinQuickGO ontologyBLASTP
31878243187979156BLASTP
318799331891741182type III secretion system proteinQuickGO ontologyBLASTP
31894323189863432transcriptional regulatorQuickGO ontologyBLASTP
31899343190227294conserved hypothetical proteinBLASTP
319029931914081110BLASTP
31914173192184768type III secretion system proteinQuickGO ontologyBLASTP
31922603192445186BLASTP
31924553193120666type III secretion system proteinQuickGO ontologyBLASTP
31931103194057948BLASTP
319418931958111623conserved hypothetical proteinBLASTP
3196033319610674tRNA-GlyQuickGO ontologyBLASTP
31961853196940756tetratricopeptide repeat transcriptional regulatorQuickGO ontologyBLASTP
319735531996522298xanthine dehydrogenase molybdenum binding subunitQuickGO ontologyBLASTP
31996633200541879xanthine dehydrogenase FAD-binding subunitQuickGO ontologyBLASTP
32005383201017480xanthine dehydrogenase Fe-S binding subunitQuickGO ontologyBLASTP
320105732028351779predicted DNA-binding transcriptional regulatorQuickGO ontologyBLASTP
320331432045011188conserved hypothetical proteinBLASTP
32045593205755119723-diaminopropionate ammonia-lyaseQuickGO ontologyBLASTP
320581332070241212predicted peptidaseQuickGO ontologyBLASTP