Pre_GI Gene

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Host: NC_014614 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_014614:2333890 Clostridium sticklandii, complete genome

Host Lineage: Clostridium sticklandii; Clostridium; unclassified Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: This Clostridium (HF strain, ATCC 12662) was initially found associated with Methanococcus vannieli in formate-enriched cultures. After its isolation in pure culture, it was shown that this organism is capable of fermenting amino acids. Biochemical studies have shown that C. sticklandii obtains energy for growth from oxidation-reduction reactions between specific amino acid pairs. Clostridium sticklandii is a Gram-positive bacterium with low (G +C) content that is capable of fermenting amino acids.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
23338902334660771Thymidylate synthase thyX TS TSaseQuickGO ontologyBLASTP
23347662334906141hypothetical protein
23349342335860927conserved membrane protein of unknown functionQuickGO ontologyBLASTP
233608723381232037Methyl-accepting chemotaxis sensory transducer precursorQuickGO ontologyBLASTP
23382532339128876conserved membrane protein of unknown function PrdGQuickGO ontologyBLASTP
233919223401991008Proline racemase A precursor TcPRACA TcPA45-A rTcPA45QuickGO ontologyBLASTP
23401962340672477putative uncharacterized protein PrdEQuickGO ontologyBLASTP
23406822341446765putative uncharacterized protein PrdDQuickGO ontologyBLASTP
23422322342492261hypothetical proteinBLASTP
234252323444121890D-proline reductase proprotein prdA Contains D-proline reductase subunit beta D-proline reductase 45 kDa subunit D-proline reductase subunit alphQuickGO ontologyBLASTP
234602623477801755Sigma-54-dependent transcriptional activatorQuickGO ontologyBLASTP
23478152348303489putative DNA-binding protein PrdXQuickGO ontologyBLASTP
234846123499061446Prolyl-tRNA synthetase 2 Proline--tRNA ligase 2 ProRS 2QuickGO ontologyBLASTP
23502512350610360hypothetical proteinBLASTP
235064323520431401cysteinyl-tRNA synthetaseQuickGO ontologyBLASTP
23520682352643576Serine acetyltransferase SATQuickGO ontologyBLASTP
23526952353609915cysteine synthase A O-acetylserine sulfhydrolase A subunitQuickGO ontologyBLASTP
235383523548511017hypothetical proteinBLASTP
235485123563381488glutamyl-tRNA synthetaseQuickGO ontologyBLASTP