Pre_GI Gene

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Host: NC_011147 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011147:3755725 Salmonella enterica subsp. enterica serovar Paratyphi A str

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a clinical isolate collected from a child with paratyphoid fever in Karachi, Pakistan, 2004. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
37557253756150426PTS system proteinQuickGO ontologyBLASTP
375636937591672799NtrC family transcriptional regulatorQuickGO ontologyBLASTP
37593643759657294hypothetical proteinBLASTP
375976337611361374glycosyl hydrolaseQuickGO ontologyBLASTP
376119637623891194ribonucleoside transporterQuickGO ontologyBLASTP
37629483763271324DNA-binding proteinQuickGO ontologyBLASTP
37633623763631270PTS system phosphocarrier proteinQuickGO ontologyBLASTP
37636413764501861fructose-16-bisphosphate aldolaseQuickGO ontologyBLASTP
376456437660481485carbohydrate kinaseQuickGO ontologyBLASTP
376604137673991359PTS system transporter subunit IICQuickGO ontologyBLASTP
37674753767762288PTS system transporter subunit IIBQuickGO ontologyBLASTP
37677593768232474hypothetical proteinBLASTP
37682503768993744GntR family transcriptional regulatorQuickGO ontologyBLASTP
37693463769798453hypothetical proteinBLASTP
37743643774954591DNA-binding transcriptional activator UhpAQuickGO ontologyBLASTP
377510837761211014hypothetical proteinBLASTP
377613337774491317permeaseQuickGO ontologyBLASTP
37774803778400921carbohydrate kinaseQuickGO ontologyBLASTP