Pre_GI Gene

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Host: NC_009092 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009092:2644164 Shewanella loihica PV-4, complete genome

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
264416426464072244aldehyde oxidase and xanthine dehydrogenase molybdopterin bindingQuickGO ontologyBLASTP
264640426469105072Fe-2S-binding domain proteinQuickGO ontologyBLASTP
26469902647736747hypothetical protein
264773326488301098protein of unknown function DUF182QuickGO ontologyBLASTP
26490072649651645beta-lactamase domain proteinQuickGO ontologyBLASTP
264983826511271290alphabeta hydrolase foldQuickGO ontologyBLASTP
265215626537751620hypothetical proteinBLASTP
26537962654341546hypothetical proteinBLASTP
265497826559911014transposase IS116IS110IS902 family proteinQuickGO ontologyBLASTP
265641826582261809AAA ATPaseQuickGO ontologyBLASTP
26582612659058798Extradiol ring-cleavage dioxygenase class III enzyme subunit BQuickGO ontologyBLASTP
26591812660155975glutathione S-transferaseQuickGO ontologyBLASTP
26602342660674441DoxX family proteinQuickGO ontologyBLASTP
26609362661850915transcriptional regulator LysR familyQuickGO ontologyBLASTP
26620642662444381tetraheme cytochrome cQuickGO ontologyBLASTP
266251226641701659phenylalaninehistidine ammonia-lyaseQuickGO ontologyBLASTP
266420726657661560flavocytochrome cQuickGO ontologyBLASTP
266596326674861524transcriptional regulator Fis familyQuickGO ontologyBLASTP
266762426687811158porin Gram-negative typeQuickGO ontologyBLASTP
26690702669291222hypothetical protein