Pre_GI Gene

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Host: NC_015975 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015975:1936504 Lactobacillus ruminis ATCC 27782 chromosome, complete genome

Host Lineage: Lactobacillus ruminis; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This organism was isolated from bovine rumen. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
193650419379941491Sucrose-6-phosphate hydrolaseQuickGO ontologyBLASTP
193802019390211002Sucrose operon repressorQuickGO ontologyBLASTP
19395791940397819endonucleaseexonucleasephosphatase family proteinQuickGO ontologyBLASTP
194062919428212193PTS system glucose-specific IIABC componentQuickGO ontologyBLASTP
194420519443211175S ribosomal RNAQuickGO ontologyBLASTP
19499251950305381hypothetical proteinBLASTP
19504051951319915PTS family mannosefructosesorbose porter component IIDQuickGO ontologyBLASTP
19513341952143810PTS family mannosefructosesorbose porter component IICQuickGO ontologyBLASTP
19521781953164987PTS system mannose-specific IIAB componentQuickGO ontologyBLASTP
19531951953710516PTS system IIB componentQuickGO ontologyBLASTP
19537001954119420PTS system mannose transporter subunit IIAQuickGO ontologyBLASTP
195442219572562835transcriptional regulatorQuickGO ontologyBLASTP
195744119590691629oligopeptide ABC transporter binding proteinQuickGO ontologyBLASTP
195926519610191755Ubiquinone biosynthesis proteinQuickGO ontologyBLASTP