Pre_GI Gene

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Host: NC_007948 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007948:517893 Polaromonas sp. JS666, complete genome

Host Lineage: Polaromonas; Polaromonas; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment contaminated with cis-dichloroethane (cDCE), a common pollutant resulting from widespread manufacture and use of industrial solvents. This bacterium is the only known organism capable of using cDCE as a sole carbon and energy source. The ability of this strain to convert ethene to epoxyethane suggests that the first step in the cDCE biodegradation pathway is the oxidation of cDCE to an epoxide compound. Bacteria that are able to grow on cDCE are rare, and have only been found in very few highly selective artificial environments. The discovery of this bacteria may provide a low cost, self-sustaining bioremediation method in areas where cDCE is a problem contaminant.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
5178935182733814-oxalocrotonate tautomeraseQuickGO ontologyBLASTP
518352519215864transcriptional regulator LysR familyQuickGO ontologyBLASTP
519985520269285hypothetical protein
520326520832507protein of unknown function DUF6 transmembraneQuickGO ontologyBLASTP
520839521264426hypothetical protein
521288521824537Alkylhydroperoxidase AhpD coreQuickGO ontologyBLASTP
521879522628750short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
522746523669924transcriptional regulator LysR familyQuickGO ontologyBLASTP
523696523956261hypothetical proteinBLASTP
523953524864912transcriptional regulator LysR familyQuickGO ontologyBLASTP
524986525540555Alkylhydroperoxidase AhpD coreQuickGO ontologyBLASTP
525589526455867alphabeta hydrolase foldQuickGO ontologyBLASTP
526482527024543protein of unknown function DUF336QuickGO ontology
527005527286282hypothetical protein
527345527602258hypothetical protein
527761528036276hypothetical protein
528131528271141hypothetical protein
528351528602252hypothetical protein
529034529264231hypothetical proteinBLASTP
529417530106690haloacid dehalogenase type IIQuickGO ontologyBLASTP
5301315316571527SSS sodium solute transporter superfamilyQuickGO ontologyBLASTP
531654531920267hypothetical proteinBLASTP
5323755337991425sigma54 specific transcriptional regulator with PAS sensor Fis familyQuickGO ontologyBLASTP
533902534492591transcriptional regulator TetR familyQuickGO ontologyBLASTP
5346315355549242-dehydropantoate 2-reductaseQuickGO ontologyBLASTP
5355515366451095mandelate racemasemuconate lactonizing enzymeQuickGO ontologyBLASTP
5379705392771308cytochrome c biogenesis protein transmembrane regionQuickGO ontologyBLASTP