Pre_GI Gene

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Host: NC_013941 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013941:3540420 Escherichia coli O55:H7 str. CB9615 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The E. coli O55:H7 strain CB9615 was isolated from an infant with diarrhea in Germany in 2003 and confirmed to belong to the same sequence type (ST11) as the O157:H7 clone by multilocus sequence typing. The O55:H7 and O157:H7 E. coli clones have been shown to be closely related. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
35394983540433936LysR family transcriptional regulatorQuickGO ontologyBLASTP
35404203541112693resistance proteinQuickGO ontologyBLASTP
354124135426591419Arabinose-proton symporterQuickGO ontologyBLASTP
354297435437357622-deoxy-D-gluconate 3-dehydrogenaseQuickGO ontologyBLASTP
354376535446018374-deoxy-L-threo-5-hexosulose-uronate ketol-isomeraseQuickGO ontologyBLASTP
354488835460691182acetyl-CoA acetyltransferaseQuickGO ontologyBLASTP
354632435475531230transporter proteinQuickGO ontologyBLASTP
35479533548645693hypothetical proteinBLASTP
35489793549788810sensory transducerQuickGO ontologyBLASTP
35497813550263483hypothetical proteinBLASTP
35504123550849438hypothetical proteinBLASTP
35509773551213237hypothetical proteinBLASTP
35512673551758492hypothetical proteinBLASTP
35519843552475492hypothetical proteinBLASTP
35530663553233168flagellum-specific ATP synthaseQuickGO ontologyBLASTP
355323835552982061type III secretion apparatus proteinQuickGO ontologyBLASTP
355530535564291125hypothetical proteinBLASTP
355643435581371704type III secretion apparatus proteinQuickGO ontologyBLASTP
35581343558883750type III secretion apparatus regulatory proteinQuickGO ontologyBLASTP
35592293559408180hypothetical proteinBLASTP
3561317356139276tRNA-GlyQuickGO ontologyBLASTP
35614703562225756hypothetical proteinBLASTP
356264135649382298xanthine dehydrogenaseQuickGO ontologyBLASTP
35649493565827879xanthine dehydrogenase FAD-binding subunitQuickGO ontologyBLASTP
35658243566303480xanthine dehydrogenase iron-sulfur-binding subunitQuickGO ontologyBLASTP
356634335681211779transcriptional regulatorQuickGO ontologyBLASTP
356859735697871191hypothetical proteinBLASTP
356984535710411197diaminopropionate ammonia-lyaseQuickGO ontologyBLASTP