Pre_GI Gene

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Host: NC_014931 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_014931:5594946 Variovorax paradoxus EPS chromosome, complete genome

Host Lineage: Variovorax paradoxus; Variovorax; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Environment: Soil; Temp: Mesophile. Variovorax paradoxus is a nutritionally diverse organism which is commonly isolated from soil. Strains of this organism are able to degrade a number of compounds such as explosives and pesticides. Variovorax paradoxus is also a plant-growth promoting organism, increasing the resistance of the plant to disease and heavy metals.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
559494655960971152Tetratricopeptide TPR_1 repeat-containing proteinQuickGO ontologyBLASTP
559606455975901527ErfKYbiSYcfSYnhG family proteinQuickGO ontologyBLASTP
55980165598201186FlpFap pilin componentQuickGO ontologyBLASTP
55987995599782984Flp pilus assembly protein CpaBQuickGO ontologyBLASTP
559982156012091389type II and III secretion system proteinQuickGO ontologyBLASTP
560124256025161275response regulator receiver proteinQuickGO ontologyBLASTP
560252156038371317type II secretion system protein EQuickGO ontologyBLASTP
56038305604822993Type II secretion system F domainQuickGO ontologyBLASTP
56048195605769951Type II secretion system F domainQuickGO ontologyBLASTP
56057665606746981Tetratricopeptide repeatQuickGO ontologyBLASTP
56072015607701501TadE family proteinQuickGO ontologyBLASTP
56076985608189492TadE family proteinQuickGO ontology
560820056103202121Protein of unknown function DUF2134 membraneQuickGO ontologyBLASTP
561041256118421431sigma54 specific transcriptional regulator Fis familyQuickGO ontologyBLASTP
561219856137751578outer membrane efflux proteinQuickGO ontologyBLASTP
561377256150881317type I secretion membrane fusion protein HlyD familyQuickGO ontologyBLASTP