Pre_GI Gene

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Host: NC_012791 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012791:4680500 Variovorax paradoxus S110 chromosome 1, complete genome

Host Lineage: Variovorax paradoxus; Variovorax; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Soil. Variovorax paradoxus S110 is able to grow autotrophically using hydrogen gas and carbon dioxide for energy and carbon. Variovorax paradoxus is a nutritionally diverse organism which is commonly isolated from soil. Strains of this organism are able to degrade a number of compounds such as explosives and pesticides. Variovorax paradoxus is also a plant-growth promoting organism, increasing the resistance of the plant to disease and heavy metals.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
468069246818731182TPR repeat-containing proteinQuickGO ontologyBLASTP
468221546833391125ErfKYbiSYcfSYnhG family proteinQuickGO ontologyBLASTP
46837534683935183FlpFap pilin componentQuickGO ontologyBLASTP
46839384684435498peptidase A24A prepilin type IVQuickGO ontologyBLASTP
46845184685513996Flp pilus assembly protein CpaBQuickGO ontologyBLASTP
468556246869351374type II and III secretion system proteinQuickGO ontologyBLASTP
468697746882601284response regulator receiver proteinQuickGO ontologyBLASTP
468826746895831317type II secretion system protein EQuickGO ontologyBLASTP
46898554690580726type II secretion system proteinQuickGO ontologyBLASTP
46905774691536960type II secretion system proteinQuickGO ontologyBLASTP
46915334692468936Tetratricopeptide domain proteinQuickGO ontologyBLASTP
46924654692884420hypothetical proteinBLASTP
46929154693385471TadE family proteinQuickGO ontologyBLASTP
469389646956651770hypothetical proteinBLASTP
469569446971331440sigma54 specific transcriptional regulator Fis familyQuickGO ontologyBLASTP
469715046987061557outer membrane efflux proteinQuickGO ontologyBLASTP
469870347000191317type I secretion membrane fusion protein HlyD familyQuickGO ontologyBLASTP